| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5284055 | 63 (1.200) | 5 (0.100) | 5/232 | NT | 7.9% | coding (412/1920 nt) | PP_4658 | methyl‑accepting chemotaxis protein |
| ? | NC_002947 | = 5284082 | 58 (1.170) | coding (439/1920 nt) | PP_4658 | methyl‑accepting chemotaxis protein | |||||
CAAGCAGCAGGCCTACCTGGCCACCACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5283904‑5284055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccatggCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGCGCGCTGCGCGGGTGGCGTCGTAGCCCTGGCGCATCTTGTTCAGCGACAGCTTGTAGGCACTGAT < NC_002947/5284082‑5283980 CAAGCAGCAGGCCTACCTGGCCACCACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT < 2:76504/150‑1CAAGCAGCAGGCCTACCTGGCCACCACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT < 2:1407437/150‑1 AAGCAGCAGGCCTACCTGGCCACCACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATG < 1:482595/150‑1 CACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATG < 1:105045/127‑1 CACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATG > 2:105045/1‑127 CAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGGCCTGGTCGGCGCGAATGGCCGAACTGTC < 1:1113736/150‑1 GTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATG < 1:967444/138‑1 GTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATG > 2:967444/1‑138 GGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGC < 1:381413/124‑1 GGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGC > 2:381413/1‑124 AGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT < 2:116684/61‑1 AGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT > 1:116684/1‑61 TCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT > 1:1297575/1‑56 TCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT < 2:1297468/56‑1 TCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT < 2:1297575/56‑1 TCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCAT > 1:1297468/1‑56 CATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGCGCGCTGCGCGGGTGGCGTCGTAGCCCTGGCGCATCTTGTTCAGCGACAGCTTGTAGGCACTGAT < 1:96423/108‑1 CATGGCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGCGCGCTGCGCGGGTGGCGTCGTAGCCCTGGCGCATCTTGTTCAGCGACAGCTTGTAGGCACTGAT > 2:96423/1‑108 CAAGCAGCAGGCCTACCTGGCCACCACCTTCAAAAGCCCGGAGAACGTCAAGCTGCTGGGTGAGCTGGGCGATACCATCAGTGCCTACAAGCTGTCGCTGAACAAGATGCGCCAGGGCTACGACGCCACCCGCGCAGCGCGCGTTTCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5283904‑5284055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccatggCCTGGTCGGCGCGAATGGCCGAACTGTCCATGGAAACGCGCGCTGCGCGGGTGGCGTCGTAGCCCTGGCGCATCTTGTTCAGCGACAGCTTGTAGGCACTGAT < NC_002947/5284082‑5283980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |