New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5318455 =	52 (0.990)	7 (0.140)	6/230	NT	13.6%	coding (967/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	5318478 =	40 (0.810)					coding (944/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase

ATCATGCCGATGTCATCTTTGCCGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATCGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5318610‑5318455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcggccTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGCAAAGATGACATCGGCATGATGCATGGCCATGTTGG  >  NC_002947/5318478‑5318625                                                                                                                                                                                                                                                                                                                  ATCATGCCGATGTCATCTTTGCCGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATCG                                                                                                                                                            >  1:166653/1‑150     TGCCGATGTCATCTTTGCCGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATCGTCGG                                                                                                                                                        <  2:166653/150‑1                       CGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATC                                                                                                                                                             <  1:664471/127‑1                       CGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATC                                                                                                                                                             >  2:664471/1‑127                                                                                                                                  TCAAGGCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGG                                                                                           >  1:600731/1‑86                                                                                                                                  TCAAGGCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGG                                                                                           <  2:600731/86‑1                                                                                                                                      GGCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGCAAAGATGACATCGG                       >  1:927623/1‑150                                                                                                                                      GGCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGC                                                                               >  2:449037/1‑94                                                                                                                                      GGCCGACGTGACTAGCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGC                                                                               <  1:449037/94‑1                                                                                                                                       GCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATC                                                                                                      <  1:455805/70‑1                                                                                                                                       GCCGACGTGCCAATCGTCGGCCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATC                                                                                                      >  2:455805/1‑70                                                                                                                                                      GTCGGCCTTTATCATCTTCGAGATCGACGCCGGGTCGCAGACGTGGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGCAAAGATGACATCGGCATGATGCATGGCCAT       <  1:1085354/150‑1                                                                                                                                                           CCTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGCAAAGATGACATCGGCATGATGCATGGCCATGTTGG  <  1:295427/150‑1                                                                                                                                                            CTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGC                                     >  1:1010781/1‑114                                                                                                                                                            CTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGC                                     <  2:1010781/114‑1                                                                                                                                                                                                                                                                                                                  ATCATGCCGATGTCATCTTTGCCGTCGGTGCGCGTTTCGACGACCGCGTTGTAAACGGCCCGGCCAAGTTCTGCCCGAACGCCAAGATCATTCACATCGACATCGACCCGGCGTCGATCTCGAAGATGATCAAGGCCGACGTGCCAATCGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5318610‑5318455 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcggccTTGATCATCTTCGAGATCGACGCCGGGTCGATGTCGATGTGAATGATCTTGGCGTTCGGGCAGAACTTGGCCGGGCCGTTTACAACGCGGTCGTCGAAACGCGCACCGACGGCAAAGATGACATCGGCATGATGCATGGCCATGTTGG  >  NC_002947/5318478‑5318625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.