New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5345732 =	67 (1.270)	8 (0.160)	8/228	NT	12.2%	coding (1082/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	5345771 =	53 (1.090)					coding (1121/1935 nt)	acsA‑II	acetyl‑CoA synthetase

TCTGCCACCAGGTATCCACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345884‑5345732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacgcaAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCC  >  NC_002947/5345771‑5345919                                                                                                                                                                                                                                                                                                                TCTGCCACCAGGTATCCACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGACTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCAC                                                                                                                                                          <  1:264711/150‑1                    AATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTC                                                                                                                                                            >  1:746728/1‑129                    AATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTC                                                                                                                                                            <  2:746728/129‑1                                                                                        CGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAG                                                                                   >  1:889030/1‑134                                                                                        CGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCATAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAG                                                                                   <  2:889030/134‑1                                                                                                                      GTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATG                                                                                             >  1:186109/1‑94                                                                                                                      GTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATG                                                                                             <  2:186109/94‑1                                                                                                                       TGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGA                                                                                    >  1:1103661/1‑102                                                                                                                       TGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGA                                                                                    <  2:1103661/102‑1                                                                                                                          GGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCG                                                                  >  1:1147298/1‑117                                                                                                                          GGTGCTCTGCAGTGGCGCGGAGCCCTCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCG                                                                  <  2:1147298/117‑1                                                                                                                                                   TCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAG                                                                                <  1:724752/78‑1                                                                                                                                                   TCACGCAAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAG                                                                                >  2:724752/1‑78                                                                                                                                                         AAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCTGGTCGGCCTTGCGCCCTAAGAATGGTACTTCGAGGAGGTAGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCC  <  1:319107/150‑1                                                                                                                                                         AAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGAGCCCAAGTGCTGCCACATTGTCGAGATGCTGTGGGAGGCCGAAACCGGCGGCATCATGCTCACCCCACTGCCC  <  1:739720/150‑1                                                                                                                                                                                                                                                                                                                TCTGCCACCAGGTATCCACAATCGGGCAGCGCTTTTGCCCGACCTCCTCGAAGTACCATTCCCAGGCTTCCGGGTTGATCGGCTCGCCGACGCTGCCCAGCAGACGCAGGCTTTTGCGTGAGGTGCTCTGCAGTGGCGCGGAGCCCTCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5345884‑5345732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacgcaAAAGCCTGCGTCTGCTGGGCAGCGTCGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTACTTCGAGGAGGTCGGGCAAAAGCGCTGCCCGATTGTGGATACCTGGTGGCAGACCGAAACCGGCGGCATCATGCTCACCCCACTGCCC  >  NC_002947/5345771‑5345919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.