| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5501464 = | 70 (1.330) | 6 (0.130) | 6/214 | NT | 11.1% | intergenic (+27/‑192) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| ? | NC_002947 | 5501542 = | 35 (0.770) | intergenic (+105/‑114) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein | |||||
GTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501622‑5501464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGC > NC_002947/5501542‑5501687 GTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTG < 2:457345/150‑1 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGT > 2:107085/1‑150 CGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAACGCCGCTCCTACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGC > 2:623380/1‑150 GGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTACGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCG > 1:781959/1‑150 ATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAC < 2:78206/143‑1 ATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAC > 1:78206/1‑143 GACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGC < 1:365073/109‑1 GACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGC > 2:365073/1‑109 ACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCG > 1:277551/1‑150 GGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTG > 1:135909/1‑57 GGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTG < 2:135909/57‑1 CCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCA < 2:277551/150‑1 GCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATT > 1:225834/1‑150 CTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGC > 1:538018/1‑150 TGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCT < 2:923738/150‑1 TCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACG > 2:465226/1‑132 TCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACG < 1:465226/132‑1 GCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAG > 1:144964/1‑150 CGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGC < 2:1251637/150‑1 GATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTA < 2:444715/83‑1 GATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTA > 1:444715/1‑83 GTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501622‑5501464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGATAGC > NC_002947/5501542‑5501687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |