| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5546370 = | 57 (1.080) | 4 (0.080) | 4/236 | NT | 6.1% | coding (162/747 nt) | rlmB | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| ? | NC_002947 | 5546409 = | 68 (1.350) | coding (123/747 nt) | rlmB | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB | |||||
TGGAAAAAATCTACGGCGTACACGCCGTGCAGGCATTGCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5546521‑5546370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGA > NC_002947/5546409‑5546555 TGGAAAAAATCTACGGCGTACACGCGGTGCAGGCATTTTTGCATCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCC > 2:1155506/1‑150 GAAAAAATCTACGGCGTACACGCCGTGCAGGCATTGCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAG > 2:1352611/1‑150 TGCAGGCATTGCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGC < 1:613071/122‑1 TGCAGGCATTGCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGC > 2:613071/1‑122 CTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGC > 1:223056/1‑119 CTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGC < 2:223056/119‑1 TTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTT > 1:877983/1‑103 TTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTT < 2:877983/103‑1 GCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTG > 2:1227197/1‑150 CAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGA < 2:531127/150‑1 TGGAAAAAATCTACGGCGTACACGCCGTGCAGGCATTGCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5546521‑5546370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGA > NC_002947/5546409‑5546555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |