New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5585725 | 59 (1.120) | 3 (0.060) | 3/240 | NT | 5.1% | coding (58/2259 nt) | parC | DNA topoisomerase IV subunit A |
? | NC_002947 | = 5585764 | 55 (1.070) | coding (19/2259 nt) | parC | DNA topoisomerase IV subunit A |
CATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5585615‑5585725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaCTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC < NC_002947/5585764‑5585721 CATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGAC < 2:1310618/150‑1 CTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC > 1:921217/1‑134 CTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC < 2:921217/134‑1 CATGGCGTAGACGATGCGTCGCTGCACCGGCTTCAGGCCGTCGCCGATATGCGGCAAGGCACGATCCATGATCACGTACATGGAGTAGTTGAGGTAGGCCTGTTCGGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5585615‑5585725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaCTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGACTTCAC < NC_002947/5585764‑5585721 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |