| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5692116 = | 64 (1.220) | 4 (0.080) | 4/236 | NT | 6.4% | coding (435/906 nt) | PP_4994 | hypothetical protein |
| ? | NC_002947 | 5692140 = | 55 (1.090) | coding (459/906 nt) | PP_4994 | hypothetical protein | |||||
CGCATGGTCGATGCGGCGTTCAGGCGATGGATGCGCGGGCGCTTGGCGTACATCTGCTGCTCGTTGGACAGCTCCGCCTCCAGGCTGGCGATCTGGCTGGACAGCTGCGAGCTGTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5692268‑5692116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCTGAACGCCGCATCGACCATGCGCGACAAGGGCGCCTGG > NC_002947/5692140‑5692284 CGCATGGTCGATGCGGCGTTCAGGCGATGGATGCGCGGGCGCTTGGCGTACATCTGCTGCTCGTTGGACAGCTCCGCCTCCAGGCTGGCGATCTGGCTGGACAGCTGCGAGCTGTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGC < 1:375954/150‑1CGCATGGTCGATGCGGCGTTCAGGCGATGGATGCGCGGGCGCTTGGCGTACATCTGCTGCTCGTTGGACAGCTCCGCCTCCAGGCTGGCGATCTGGCTGGACAGCTGCGAGCTGTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGC < 2:874171/150‑1 GTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGCGCCGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCT < 1:1049975/148‑1 GTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGCGCCGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCT > 2:1049975/1‑148 GCGTCGGCGCGGCTGGCTTGGGCTGCGCCGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGA < 1:1397897/86‑1 GCGTCGGCGCGGCTGGCTTGGGCTGCGCCGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGA > 2:1397897/1‑86 GCGCCGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCTGAACGCCGCATCGACCATGCGCGACAAGGGCGCCTGG < 1:801552/150‑1 CGCATGGTCGATGCGGCGTTCAGGCGATGGATGCGCGGGCGCTTGGCGTACATCTGCTGCTCGTTGGACAGCTCCGCCTCCAGGCTGGCGATCTGGCTGGACAGCTGCGAGCTGTCGAAGTCCGGCGTCGGCGCGGCTGGCTTGGGCTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5692268‑5692116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccGACGCCGGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGCCAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCTGAACGCCGCATCGACCATGCGCGACAAGGGCGCCTGG > NC_002947/5692140‑5692284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |