| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5698783 = | 51 (0.970) | 8 (0.180) | 6/212 | NT | 13.7% | intergenic (+17/‑150) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
| ? | NC_002947 | 5698866 = | 57 (1.260) | intergenic (+100/‑67) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein | |||||
GGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698938‑5698783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGG > NC_002947/5698866‑5699008 GGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCC < 2:1196274/150‑1 GCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTGGTGGTGGCGCGTGCAGGAGCGGGCTTGCCC > 2:242627/1‑150 CCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCG > 2:779166/1‑150 CATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCAAGCCCGC < 1:898553/150‑1 CCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGC > 1:274206/1‑150 CCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGC > 1:768394/1‑150 ACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCAT > 1:826452/1‑150 GGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGC < 1:1425883/98‑1 GGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGC > 2:1425883/1‑98 ATCACCACAGGCCCAAGGGTTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAAC > 1:503368/1‑150 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGT > 1:91226/1‑89 CACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGT < 2:91226/89‑1 TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGC < 1:762308/150‑1 CCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAG < 2:274206/150‑1 CCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCC < 2:989077/73‑1 CCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCC > 1:989077/1‑73 CCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGATTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCCAGACCCTCAGCCTCACCTACGCACCCGGCGAGG > 1:144965/1‑150 GGCCATGGGCAGAATCTCTCGGGAGCTGATGAAGCACAGCTTCCAGCTTATGGGGGAGGGATTCAAGGGCCTCTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5698938‑5698783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaaGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAAAGCCTCCAAGACCCTCAGCCTCACCTACGCACCCGGCGAGG > NC_002947/5698866‑5699008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |