New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5729998 =	57 (1.080)	4 (0.080)	4/232	NT	7.2%	coding (536/1083 nt)	pip	proline iminopeptidase
	?	NC_002947	5730032 =	50 (1.010)					coding (502/1083 nt)	pip	proline iminopeptidase

AGACCTGGAGCGCATTCGCGAACACCTTGGCATAGACAAGTGGGTGCTGTTCGGTGGTTCTTGGGGCTCGACCCTGGCCCTGGCCTACGCTCAGGCTCACCCCGAACGCGTGCACGGCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5730153‑5729998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaggaTCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGTCTATGCCAAGGTGTTCGCGAATGCGCTCCAGGTCTTCGACCAGGTGCCAGGTGGTGTTGT  >  NC_002947/5730032‑5730178                                                                                                                                                                                                                                                                                                                 AGACCTGGAGCGCATTCGCGAACACCTTGGCATAGACAAGTGGGTGCTGTTCGGTGGTTCTTGGGGCTCGACCCTGGCCCTGGCCTACGCTCAGGCTCACCCCGAACGCGTGCACGGCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCC                                                                                                                                                           >  2:640582/1‑150                                                  TTCGGTGGTTCTTGGGGCTCGACCCTGGCCCTGGCCTACGCTCAGGCTCACCCCGAACGCGTGCACGGCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAG                                                                                                                                                       <  1:1367962/105‑1                                                  TTCGGTGGTTCTTGGGGCTCGACCCTGGCCCTGGCCTACGCTCAGGCTCACCCCGAACGCGTGCACGGCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAG                                                                                                                                                       >  2:1367962/1‑105                                                                                                                     GCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAAC                                                                           <  1:1125807/114‑1                                                                                                                     GCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAAC                                                                           >  2:1125807/1‑114                                                                                                                             CTGCGCGGCATCTTCCTGTGCCGGCCGCAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGT                                                              <  1:183228/119‑1                                                                                                                             CTGCGCGGCATCTTCCTGTGCCGGCCGCAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGT                                                              >  2:183228/1‑119                                                                                                                                                      CGCAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGTCTATGCCAAGGTGTTCGCGAATGCGCTCCAGGTCTTCGACCAGGTGCCAGGTGGTG      <  1:1017016/150‑1                                                                                                                                                        CAGGATCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGTCTATGCCAAGGTGTTCGCGAATGCGCTCCAGGTCTTCGACCAGGTGCCAGGTGGTGTT    <  1:556501/150‑1                                                                                                                                                          GGATCAGGCCGGGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGTCTATGCCAAGGTGTTCGCGAATGCGCTCCAGGTCTTCGACCAGGTGCCAGGTGGTGTTGT  <  1:1244663/150‑1                                                                                                                                                                                                                                                                                                                 AGACCTGGAGCGCATTCGCGAACACCTTGGCATAGACAAGTGGGTGCTGTTCGGTGGTTCTTGGGGCTCGACCCTGGCCCTGGCCTACGCTCAGGCTCACCCCGAACGCGTGCACGGCCTGATCCTGCGCGGCATCTTCCTGTGCCGGCCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5730153‑5729998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaggaTCAGGCCGTGCACGCGTTCGGGGTGAGCCTGAGCGTAGGCCAGGGCCAGGGTCGAGCCCCAAGAACCACCGAACAGCACCCACTTGTCTATGCCAAGGTGTTCGCGAATGCGCTCCAGGTCTTCGACCAGGTGCCAGGTGGTGTTGT  >  NC_002947/5730032‑5730178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.