| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5765441 | 77 (1.460) | 9 (0.180) | 9/232 | NT | 11.5% | coding (41/768 nt) | PP_5059 | hypothetical protein |
| ? | NC_002947 | = 5765457 | 66 (1.330) | coding (57/768 nt) | PP_5059 | hypothetical protein | |||||
CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5765287‑5765441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < NC_002947/5765457‑5765309 CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATG > 2:547481/1‑150 TGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCATCAG > 1:1257623/1‑144 TGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCATCAG < 2:1257623/144‑1 GCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGTTGGCCGGTGCCGCTTGCGCGATTCCGGC < 1:604989/120‑1 GCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGTTGGCCGGTGCCGCTTGCGCGATTCCGGC > 2:604989/1‑120 AGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 1:589287/122‑1 AGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA > 2:589287/1‑122 TCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGGTGCCGCTTGCGCGATTCCGGCC > 1:984550/1‑103 TCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGGTGCCGCTTGCGCGATTCCGGCC < 2:984550/103‑1 AGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCG < 1:109877/77‑1 AGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCG > 2:109877/1‑77 GCTGTGTCTGTTGTTTTGCC‑TGATGGCCGGAATCGCGCAAGTGGCACCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGC > 1:1032100/1‑150 CCGGTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTC < 1:1139945/150‑1 GTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < 1:887171/150‑1 CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCC‑TGATGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5765287‑5765441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < NC_002947/5765457‑5765309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |