New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5786551 | 57 (1.080) | 6 (0.140) | 4/198 | NT | 10.7% | intergenic (+38/‑93) | PP_5068/trxC | hypothetical protein/thioredoxin |
? | NC_002947 | = 5786588 | 54 (1.280) | intergenic (+75/‑56) | PP_5068/trxC | hypothetical protein/thioredoxin |
GGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5786381‑5786551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaaCACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTTGCATCCCGGG < NC_002947/5786588‑5786442 GGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGT > 1:698914/1‑150 AGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGGACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGAAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGC > 2:989518/1‑150 TGAAGTTCGACGGCTGCACCGAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGT < 1:685668/150‑1 AAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCacgc < 2:599529/150‑5 GTTCGACGGCTGCACCAAGTCCTGCCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCC < 1:1030230/150‑1 TCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGC < 2:857429/129‑1 TCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGC > 1:857429/1‑129 TTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCAC > 1:851430/1‑150 GGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 2:851430/150‑1 AAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 1:1167009/144‑1 AAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG > 2:1167009/1‑144 AAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAA > 1:156099/1‑100 AAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAA < 2:156099/100‑1 GAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG > 1:300580/1‑121 GAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 2:300580/121‑1 GGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCG > 2:961199/1‑150 tcGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGCAAGAGCAGCTGATTTCCAGGTGCTTGCCCCCCTCCCCCGGTCGCTCGGCGT > 1:52138/3‑150 GGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGC > 2:713614/1‑150 GCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTT < 1:1048984/150‑1 GCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTT < 1:822446/150‑1 CGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTTG < 1:907895/150‑1 TGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCGCAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAG < 1:1354743/109‑1 TGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAG > 2:1354743/1‑109 CCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCC < 2:434793/65‑1 CCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCC > 1:434793/1‑65 GCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTTGCATCCCG > 2:746513/1‑150 GAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTTGCATCCCGGG < 2:787059/150‑1 GGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5786381‑5786551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaaCACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGATTCGGCGCTAATCAGGAAGAGCAGCTGATTTCCAGGTGCTTGCCCCACTCCGGCGGTCGCTCGGCGTAGGCTTGCATCCCGGG < NC_002947/5786588‑5786442 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |