| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5929577 = | 57 (1.080) | 3 (0.060) | 3/234 | NT | 5.1% | coding (867/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase |
| ? | NC_002947 | 5929646 = | 57 (1.140) | coding (798/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase | |||||
ATGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5929731‑5929577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGGCA > NC_002947/5929646‑5929794 ATGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAG < 2:435624/150‑1 GAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTG < 1:1284308/150‑1 GGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAG < 1:1362568/77‑1 GGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAG > 2:1362568/1‑77 CTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTG > 1:457344/1‑150 CGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCT > 1:668751/1‑66 CGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTGAAGCACCTCGCCCAGACGCCCT < 2:668751/66‑1 CCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACG < 2:404041/150‑1 GAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGGCA < 1:961951/150‑1 GAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGC < 1:241076/85‑1 GAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGC > 2:241076/1‑85 ATGCCGAGCAGTTGATGGCGATGGATGAAGCGGCCTTCCTGCAGGCCCTGGAGCGGGCCTTCGAAGGGCGTCTGGGCGAGGTGCTTCAGGCCGACCCACGGGTGTGCGTGCCGCTGCGCCAGCGACACGCCAAGCGCTACGTGGATGAAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5929731‑5929577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCAGACGATCGAGCACCAGTCCTGCTGGCCATCGCGGGTCAACGGCA > NC_002947/5929646‑5929794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |