| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5955866 = | 44 (0.840) | 6 (0.120) | 6/228 | NT | 14.2% | intergenic (+36/+168) | elbB/PP_5221 | putative hydrolase/hypothetical protein |
| ? | NC_002947 | 5955911 = | 32 (0.660) | intergenic (+81/+123) | elbB/PP_5221 | putative hydrolase/hypothetical protein | |||||
TAGGCGACAGCCCAGGCTGGCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAGCGATCGCGCAGTTGCCCCACAGGCTATCGCGCAGTTGCCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5956023‑5955866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGGGCAA > NC_002947/5955911‑5956056 TAGGCGACAGCCCAGGCTGGCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAGCGATCGCGCAGTTGCCCCACAGGCTATCGCGCAGTTGCCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGA > 1:1229821/1‑150TAGGCGACAGCCCAGGCTGGCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAGCGATCGCGCAGTTGCCCCACAGGCTATCGCGCAGTTGCCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGA > 2:1128321/1‑150 CGACAGCCCAGGCTGGCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAGCGAGCGCGCAGTTGCCCCACAGGCTATCGCGCAGTTGCCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTG < 1:454715/150‑1 CCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCT > 1:633419/1‑150 CACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTG < 1:1132929/64‑1 CACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTG > 2:1132929/1‑64 ACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGT > 1:1118524/1‑149 ACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACAGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGT < 2:1118524/149‑1 TGAAGCCTGCGCTGGACCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCA < 2:633419/150‑1 CCTGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGG > 2:1356801/1‑150 TGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGGGC > 2:402617/1‑150 TGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTG < 1:1013158/112‑1 TGTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGGGCCATCCACCGCTCCAGCCTGGGCTG > 2:1013158/1‑112 GTGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGGGCA > 2:779373/1‑150 TGGGGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGGGCAA < 1:779373/150‑1 GGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGA < 1:741487/136‑1 GGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGA > 2:741487/1‑136 TAGGCGACAGCCCAGGCTGGCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACAAGCGATCGCGCAGTTGCCCCACAGGCTATCGCGCAGTTGCCCCACAGGTACCGCGTGGCCTTGAAGCCTGCGCTGGACCTGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5956023‑5955866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggGCAACTGCGCGATAGCCTGTGGGGCAACTGCGCGATCGCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGCCAGCCTGGGCTGTCGCCTACAGGAATCTGTCAGCCTTTCGAGAGCCGGGCAA > NC_002947/5955911‑5956056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |