New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5999355 | 49 (0.930) | 4 (0.080) | 4/230 | NT | 7.2% | intergenic (‑154/‑167) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
? | NC_002947 | = 5999440 | 58 (1.180) | intergenic (‑239/‑82) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
CATGGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5999199‑5999355 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggccCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAAC < NC_002947/5999440‑5999298 CATGGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTT < 2:853/150‑1 ATGGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTG > 2:1009950/1‑150 GGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG < 2:1251527/150‑1 TAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG < 1:857913/120‑1 TAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG > 2:857913/1‑120 AACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGT < 2:417458/150‑1 ctggTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGG < 1:1070312/146‑1 TGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATATGCCGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACTGGCGTGCCCGCGAAGAGGCCA < 1:1142809/150‑1 TTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCATTACCACCGGTAAAGCGCTTGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAA < 1:531132/150‑1 TGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAA < 2:1033586/150‑1 GCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAAC < 1:614539/150‑1 CATGGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5999199‑5999355 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggccCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAAC < NC_002947/5999440‑5999298 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |