| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6109613 | 56 (1.070) | 4 (0.080) | 4/234 | NT | 7.1% | coding (81/972 nt) | PP_5359 | CobW/P47K family protein |
| ? | NC_002947 | = 6109629 | 51 (1.020) | coding (65/972 nt) | PP_5359 | CobW/P47K family protein | |||||
TAAGGCTGCATCCAGGCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6109541‑6109613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgaTCCGTCACTTGCTGGCTCAGCGCCCAGCCAACGAGCGCTGGGCGGTATTGATCAACGAGTTCGGCCTTGTCGGCCTGGATGCAGCCTTACTCAGCCGTGACGAAGACGGCATCGCCATCGGCGAGGTCGCAGGCGGCTGCCTGTGCTGC < NC_002947/6109629‑6109481 TAAGGCTGCATCCAGGCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGATCCGTCACTTGCTGGCTCA < 1:827696/92‑1TAAGGCTGCATCCAGGCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGATCCGTCACTTGCTGGCTCA > 2:827696/1‑92 GCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGATCCGTCACTTGCTGGCTCAGCGCCCAGCCAAC > 1:1171594/1‑90 GCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGATCCGTCACTTGCTGGCTCAGCGCCCAGCCAAC < 2:1171594/90‑1 CTGATCCGTCACTTGCTGGCTCAGCGCCCAGCCAACGAGCGCTGGGCGGTATTGATCAACGAGTTCGGCCTTGTCGGCCTGGATGCAGCCTTACTCAGCCGTGACGAAGACGGCATCGCCATCGGCGAGGTCGCAGGCGGCTGCCTGTGC < 2:539649/150‑1 ATCCGTCACTTGCTGGCTCAGCGCCCAGCCAACGAGCGCTGGGCGGTATTGATCAACGAGTTCGGCCTTGTTGGCCTGGATGCAGCCTTACTCAGCCGTGACGAAGACGGCATCGCCATCGGCGAGGTCGCAGGCGGCTGCCTGTGCTGC < 1:116093/150‑1 TAAGGCTGCATCCAGGCCGACAAGGCCGAACTCGTTGATCAATACCGCCCAGCGCTCGTTGGCTGGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6109541‑6109613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgaTCCGTCACTTGCTGGCTCAGCGCCCAGCCAACGAGCGCTGGGCGGTATTGATCAACGAGTTCGGCCTTGTCGGCCTGGATGCAGCCTTACTCAGCCGTGACGAAGACGGCATCGCCATCGGCGAGGTCGCAGGCGGCTGCCTGTGCTGC < NC_002947/6109629‑6109481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |