New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 208935	NA (NA)	3 (0.060)	3/236	NT	5.0%	coding (14441/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 210907	59 (1.120)					coding (16413/26049 nt)	PP_0168	putative surface adhesion protein

GGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGATGGCAAAACCAC  >  NC_002947/208852‑209073                                                                                    |                                                                                                                                           ggTGGACGCCACTGGTCCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCt                                                                          >  1:693788/1‑150 (MQ=17)   tGGACGCCACTGGTCCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGCCGAGATCACCTACACCATCACGCTGa                                                                        <  2:693788/150‑1 (MQ=17)                  cGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTc                                                         >  1:1571/1‑150 (MQ=32)                   gACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCt                                                        >  1:1199994/1‑150 (MQ=32)                     cgttCGAGAACCGCGAGCGGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGc                                                      <  2:1414286/148‑1 (MQ=12)                      cTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATgg                                                           >  1:157452/1‑144 (MQ=32)                      cTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATgg                                                           <  2:157452/144‑1 (MQ=32)                                     gCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATgc                                      <  2:1199994/150‑1 (MQ=255)                                               gCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTAGGTAACCGATTGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGAcc                            <  1:883134/150‑1 (MQ=255)                                                          ggATGTGACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGa                 >  2:1422766/1‑150 (MQ=18)                                                              gTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGAt             <  1:1268385/150‑1 (MQ=35)                                                              gTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCAAGTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGAt             <  1:454373/150‑1 (MQ=25)                                                               tCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGATg            <  1:258869/150‑1 (MQ=34)                                                               tCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGATg            <  1:528027/150‑1 (MQ=34)                                                                         caccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTg                   <  2:1012199/133‑1 (MQ=33)                                                                         caccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTg                   >  1:1012199/1‑133 (MQ=33)                                                                         caccGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGATGGCAAAaccac  >  1:1216207/1‑150 (MQ=32)                                                                                    |                                                                                                                                           GGTGGACGCCACTGGTGCGACCTTCGAGAACCTCGAGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTAACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGATGGTCTGCCTATCGACAAGCATGCGGCGCTGACCTTTACCCTGGACGATGGCAAAACCAC  >  NC_002947/208852‑209073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.