New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 706865 =45 (0.860)9 (0.200) 9/214 NT 19.1% intergenic (+38/+208) PP_0599/rpsT paraquat‑inducible protein B/30S ribosomal protein S20
?NC_002947 706982 = 37 (0.810)intergenic (+155/+91) PP_0599/rpsT paraquat‑inducible protein B/30S ribosomal protein S20

ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAG  >  NC_002947/706718‑707013
                                                                                                                                                    |                                                                                                                                                    
aTGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT                                                                                                                                                    <  1:482005‑M1/150‑1 (MQ=255)
  caaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatctgtg                                                                                                                                                   >  1:670766‑M1/147‑150 (MQ=255)
     aggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGa                                                                                                                                                >  1:587758‑M1/144‑150 (MQ=255)
          gtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGc                                                                                                                                           <  2:593069‑M1/12‑1 (MQ=255)
          gATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTAGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCC                                                                                                                                          >  1:27672‑M1/1‑150 (MQ=255)
            tGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTT                                                                                                                                        <  2:1274794‑M1/150‑1 (MQ=255)
            ctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCt                                                                                                                                         >  2:961929‑M1/137‑150 (MQ=255)
             gggTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG                                                                                                                                       <  1:1030637‑M1/150‑1 (MQ=255)
               gTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCg                                                                                                                                     >  1:1213698/1‑150 (MQ=255)
                    ccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTcgcg                                                                                                                                >  2:544921/1‑150 (MQ=255)
                    ccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTcgcg                                                                                                                                >  1:227087/1‑150 (MQ=255)
                    ccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTcgcg                                                                                                                                >  2:719371/1‑150 (MQ=255)
                    ccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT                                                                                                                                         >  1:81479‑M1/1‑141 (MQ=255)
                    ccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT                                                                                                                                         <  2:81479‑M1/141‑1 (MQ=255)
                      acatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTgg                                                                                                                                                  >  2:346684‑M1/127‑131 (MQ=255)
                      acatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTgg                                                                                                                                                  <  1:346684‑M1/5‑1 (MQ=255)
                           aaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgccggcccagttccatgcgggactcgatcTTTGGGAGCGGCCTTGCGTCGCGAAAggg                                                                                                                          <  1:161285‑M1/29‑1 (MQ=255)
                                  gcagACCTTTGCCTTGTTCGAAAAGGCCGAGGCTGAATGGCTGCAGTGGGAACCGAGAAGTCAGATCGCCAACGGATGCAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAg                                                                                                                  >  1:1243718/1‑150 (MQ=38)
                                   cagACCTTTGCCTTGTTGGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGc                                                                                                                 <  2:1243718/150‑1 (MQ=255)
                                         tttGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGcccc                                                                                                           <  2:775094/150‑1 (MQ=255)
                                            gCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCg                                                                                                        <  2:1213698/150‑1 (MQ=255)
                                               ttGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGtc                                                                                                     >  2:672824/1‑150 (MQ=255)
                                               agctgcctaagcgacgcgctagtcgaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGt                                                                                                      <  2:1352726‑M1/49‑1 (MQ=255)
                                                  ttCGAAAAGGCCGAGGATGAATGGCTGCAGAGGGCACCGAAGATTAAGATCGCCAGGTGATGTAAAAGTAGGGCTGCCCAAACTCTTGGGGCTGTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCCCGGAGCGCCCGTTCGGtctcg                                                                                                  >  1:678564/1‑149 (MQ=255)
                                                       aaaGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCa                                                                                             <  2:554901/150‑1 (MQ=255)
                                                           gCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgc                                                                                         >  1:414485‑M1/1‑104 (MQ=255)
                                                           gCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCa                                                                                                  <  1:147363/141‑1 (MQ=255)
                                                           gCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCa                                                                                                  >  2:147363/1‑141 (MQ=255)
                                                                     aaTGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGc                                                                               <  2:618869/150‑1 (MQ=255)
                                                                       gaaaaaccgaccctaggcgcggattttggttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGcc                                                                              <  2:127395‑M1/73‑1 (MQ=255)
                                                                       aaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGc                                                                                                                                           >  2:360452‑M1/78‑89 (MQ=255)
                                                                       aaaaaaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGc                                                                                                                                           <  1:360452‑M1/12‑1 (MQ=255)
                                                                          cTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCgggg                                                                          <  2:27672/150‑1 (MQ=255)
                                                                           tGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGc                                                                         >  1:1235071/1‑150 (MQ=255)
                                                                           aaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTg                                                                                                                                       >  2:1155465‑M1/74‑89 (MQ=255)
                                                                           aaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTg                                                                                                                                       <  1:1155465‑M1/16‑1 (MQ=255)
                                                                           aaccgaccctagggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCgggg                                                                          <  2:1414619‑M1/77‑1 (MQ=255)
                                                                                    cACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCg                                                                                                        >  2:138196/1‑110 (MQ=255)
                                                                                    cACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCg                                                                                                        <  1:138196/110‑1 (MQ=255)
                                                                                    cACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCa                                                                <  1:787872/150‑1 (MQ=255)
                                                                                       ggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatctgt                                                                                                                                                    <  1:1017949‑M1/3‑1 (MQ=255)
                                                                                       ggtcggttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatctgt                                                                                                                                                    >  2:1017949‑M1/62‑64 (MQ=255)
                                                                                       cGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGcc                                                             >  1:352277/1‑150 (MQ=255)
                                                                                             ttttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATc                                                        >  1:1414619‑M1/56‑150 (MQ=255)
                                                                                             ttCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATcg                                                       >  1:1134671/1‑150 (MQ=255)
                                                                                              tttttgttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATcg                                                       >  1:127395‑M1/55‑150 (MQ=255)
                                                                                              tCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATcgc                                                      <  2:352277/150‑1 (MQ=255)
                                                                                              tCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATcgc                                                      >  2:208953/1‑150 (MQ=255)
                                                                                                aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTTCCGGGGCTGCCCCGCAGCCCTATCGCGa                                                    <  1:955338/150‑1 (MQ=255)
                                                                                                aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCg                                                                  <  2:693507/136‑1 (MQ=255)
                                                                                                aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCg                                                                  >  1:693507/1‑136 (MQ=255)
                                                                                                aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGa                                                    <  2:227087/150‑1 (MQ=255)
                                                                                                aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGa                                                    >  1:1032301/1‑150 (MQ=255)
                                                                                                   tCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAg                                                                                                 >  2:281837/1‑102 (MQ=255)
                                                                                                   tCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAg                                                                                                 <  1:281837/102‑1 (MQ=255)
                                                                                                    ttgcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGacac                                                 <  2:1099011‑M1/102‑1 (MQ=255)
                                                                                                     gCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaa                                               <  2:414485‑M1/150‑89 (MQ=255)
                                                                                                      gcctgcgatttatgcttgcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACaa                                               >  1:1352726‑M1/47‑150 (MQ=255)
                                                                                                      ccAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaag                                              <  1:86916‑M2/150‑5 (MQ=255)
                                                                                                         aGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaaggcc                                           >  1:672824‑M2/1‑143 (MQ=255)
                                                                                                              tGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgtgacgcaaggccgctcc                                      <  1:1373739‑M1/150‑98 (MQ=255)
                                                                                                              agcaaaagtaGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaaggccgctcc                                      >  1:1309223‑M2/4‑138 (MQ=255)
                                                                                                                   aaGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAg                                 >  2:693856/1‑150 (MQ=255)
                                                                                                                     gTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGACTCAGCGCAGAAAATGAGATTGCCGGGGCTGCCCCGCAGGCCTATGGCGACAAAAGGCCGCTCCCACAGac                               >  1:485107/1‑149 (MQ=37)
                                                                                                                       gcgggcccagttccatgcgggactcgatcTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATc                              >  1:1099011‑M1/30‑150 (MQ=255)
                                                                                                                        gggCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGa                            >  2:1226845/1‑150 (MQ=255)
                                                                                                                                  aGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGTCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCAt                   <  1:208953/150‑1 (MQ=255)
                                                                                                                                   gcgcGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATg                  <  2:1032301/150‑1 (MQ=255)
                                                                                                                                    cgcgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATgg                 <  2:86916/150‑1 (MQ=255)
                                                                                                                                     gcgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGac                                                   >  2:437997/1‑115 (MQ=255)
                                                                                                                                     gcgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGac                                                   <  1:437997/115‑1 (MQ=255)
                                                                                                                                     gcgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGa                >  2:448974/1‑150 (MQ=255)
                                                                                                                                          ccTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCa                    <  1:428322/141‑1 (MQ=255)
                                                                                                                                          ccTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCa                    >  2:428322/1‑141 (MQ=255)
                                                                                                                                           cTGCTTTTTTGTGGGTGCTGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCTGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTggg          >  2:40934/1‑150 (MQ=255)
                                                                                                                                            tGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATg                  >  1:376276/1‑141 (MQ=255)
                                                                                                                                            tGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATg                  <  2:376276/141‑1 (MQ=255)
                                                                                                                                            tGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGc         >  1:593069/1‑150 (MQ=255)
                                                                                                                                                  tttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCaa   <  1:544921/150‑1 (MQ=255)
                                                                                                                                                   ttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCTGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAg  <  1:40934/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAG  >  NC_002947/706718‑707013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.