New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1780096 =28 (0.530)12 (0.250) 9/222 NT 30.7% intergenic (+13/+93) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
?NC_002947 1780184 = 29 (0.610)intergenic (+101/+5) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase

GCGTGCCCTGAGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGG  >  NC_002947/1779954‑1780241
                                                                                                                                              |                                                                                                                                                 
taccggggtcgtacctgtcgcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTcgc                                                                                                                                            <  2:631304‑M1/8‑1 (MQ=255)
  cgggggtcgtatcggtcgcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCgg                                                                                                                                          >  2:679511‑M1/141‑150 (MQ=255)
    gCCCTGAGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGgc                                                                                                                                        <  1:725899/150‑1 (MQ=255)
      ccTGAGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGgcac                                                                                                                                      >  1:152164/1‑148 (MQ=255)
       cTGAGGGCGCAGCGGCTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCG                                                                                                                                     >  1:35908‑M1/1‑150 (MQ=255)
        tGAGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGC                                                                                                                                    >  2:280537‑M1/1‑150 (MQ=255)
          aGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCC                                                                                                                                  >  2:472754‑M1/1‑150 (MQ=255)
                cAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCC                                                                                                                            >  2:1295368‑M1/1‑150 (MQ=255)
                             tGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGc                                                                                                                                                   <  1:406027/114‑1 (MQ=255)
                             tGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGc                                                                                                                                                   >  2:406027/1‑114 (MQ=255)
                              gTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTActgcgct                                                                                                              <  1:1295368/150‑1 (MQ=255)
                               tACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTAct                                                                                                                   >  1:72302/1‑144 (MQ=255)
                               tACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTAct                                                                                                                   <  2:72302/144‑1 (MQ=255)
                                  aaCCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACtgcgctgcgc                                                                                                          >  2:942379/1‑150 (MQ=255)
                                  aaCCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatt                                                                                                          >  2:597744‑M1/1‑140 (MQ=255)
                                     cTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCgg                                                                                                                                          <  1:1355322/115‑1 (MQ=255)
                                     cTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCgg                                                                                                                                          >  2:1355322/1‑115 (MQ=255)
                                      tGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCAC                                                                                                                          >  2:1049960‑M1/1‑130 (MQ=255)
                                      tGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCAC                                                                                                                          <  1:1049960‑M1/130‑1 (MQ=255)
                                       gCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGGGGTTAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGaa                                                                                                     <  1:799729/150‑1 (MQ=255)
                                          tCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGAGAAAGGTGAAAATGAGTGAGGCGAACCGGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATc                                                                                                  >  1:1106445/1‑150 (MQ=255)
                                          cgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATc                                                                                                  >  2:290300‑M1/101‑150 (MQ=255)
                                              cAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAgcg                                                                                              >  1:631304/1‑150 (MQ=255)
                                                gCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgca                                                                                            <  2:35908‑M1/150‑25 (MQ=255)
                                                 cACCTGGTGGGGGAGGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGCGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcag                                                                                           <  1:596990‑M1/150‑26 (MQ=255)
                                                  gggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGt                                                                                          >  2:33105‑M1/93‑150 (MQ=255)
                                                  aCCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgt                                                                                          >  2:203074‑M2/1‑148 (MQ=255)
                                                  aCCTGGTGGGGGATGAGGTGGCGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagt                                                                                          >  1:1337965‑M1/1‑124 (MQ=255)
                                                   ccTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagta                                                                                         <  2:1337965‑M1/150‑28 (MQ=255)
                                                        tggGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagtacctgt                                                                                    <  2:152164‑M1/150‑33 (MQ=255)
                                                          ggggATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagtacctgtgg                                                                                  <  1:280537‑M1/150‑35 (MQ=255)
                                                          ggggATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgtacctgtgg                                                                                  >  2:282760‑M2/1‑140 (MQ=255)
                                                             catggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGa                                                                                >  1:876192‑M1/82‑149 (MQ=255)
                                                             catggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGa                                                                                <  2:876192‑M1/68‑1 (MQ=255)
                                                                 aGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagtacctgtgggagcggg                                                                           <  1:597744‑M1/150‑42 (MQ=255)
                                                                   gtggtgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgtacctgtgggagcgggcg                                                                         <  2:369780‑M2/150‑20 (MQ=255)
                                                                   gtggtgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgtacctgtgggagcgggcg                                                                         <  2:1033999‑M2/150‑20 (MQ=255)
                                                                      gtgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGc                                                                      >  1:635171/1‑150 (MQ=255)
                                                                           gCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgtacctgtgg                                                                                  <  2:525005‑M2/133‑11 (MQ=255)
                                                                           gCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgtacctgtgg                                                                                  >  1:525005‑M2/1‑123 (MQ=255)
                                                                             aaGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                               >  1:1059106/1‑150 (MQ=255)
                                                                                     ggTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAgggcatga                                                       >  1:82129/1‑145 (MQ=255)
                                                                                      gTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGaaa                                                                                                    <  2:652255/104‑1 (MQ=255)
                                                                                      gTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGaaa                                                                                                    >  1:652255/1‑104 (MQ=255)
                                                                                               gaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGa                                                                                >  1:890418‑M1/48‑115 (MQ=255)
                                                                                               gaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGa                                                                                <  2:890418‑M1/68‑1 (MQ=255)
                                                                                               atatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGttt                                             <  1:369780/150‑1 (MQ=255)
                                                                                                   gagtgagGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCa                                         <  1:968289/150‑1 (MQ=255)
                                                                                                          gCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgc                                  >  2:483439/1‑150 (MQ=255)
                                                                                                           cgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCt                                                                                      <  2:804419‑M1/62‑1 (MQ=255)
                                                                                                           cgcattcgcgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCt                                                                                      >  1:804419‑M1/36‑97 (MQ=255)
                                                                                                            gAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                <  1:472754/150‑1 (MQ=255)
                                                                                                                   cgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGt                                                                                          >  2:501774‑M1/28‑85 (MQ=255)
                                                                                                                   cgccttcctgcaaaaccgctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGt                                                                                          <  1:501774‑M1/58‑1 (MQ=255)
                                                                                                                         gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagtac                                                                                        <  2:932822‑M1/81‑29 (MQ=255)
                                                                                                                         gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACagcgctgatttcaagcgcagcgcagtac                                                                                        >  1:932822‑M1/1‑53 (MQ=255)
                                                                                                                          tCAAGTAGACCCTATCAAGTCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTccgcc                  >  2:1090777/1‑150 (MQ=255)
                                                                                                                          tCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGt                                                          >  1:20046/1‑110 (MQ=255)
                                                                                                                          tCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGt                                                          <  2:20046/110‑1 (MQ=255)
                                                                                                                                 gACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGa                                                       <  2:240986/106‑1 (MQ=255)
                                                                                                                                 gACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGa                                                       >  1:240986/1‑106 (MQ=255)
                                                                                                                                  aCCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGCGCGGGCGTGCCCGCGACGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGAt          >  2:117637/1‑150 (MQ=255)
                                                                                                                                    gctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCt                                                                                      <  1:552993‑M1/62‑1 (MQ=255)
                                                                                                                                    gctgatcaacCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCt                                                                                      >  2:552993‑M1/11‑72 (MQ=255)
                                                                                                                                    ccTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAg                                                              >  1:1011235/1‑96 (MQ=255)
                                                                                                                                    ccTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAg                                                              <  2:1011235/96‑1 (MQ=255)
                                                                                                                                         cAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCg   <  1:1090777/150‑1 (MQ=255)
                                                                                                                                          aaGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCgg  >  2:694602/1‑150 (MQ=255)
                                                                                                                                           aaccccttcGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgt                                                                                          <  1:395502‑M2/58‑3 (MQ=255)
                                                                                                                                           aaccccttcGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTgt                                                                                          >  2:395502‑M2/4‑59 (MQ=255)
                                                                                                                                              |                                                                                                                                                 
GCGTGCCCTGAGGGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGG  >  NC_002947/1779954‑1780241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.