New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2412899	74 (1.410)	6 (0.120)	5/236	NT	8.3%	intergenic (+120/‑301)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	4909938 =	61 (1.210)					intergenic (+286/+193)	PP_4318/PP_4319	transposase/hypothetical protein

TTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTT  >  NC_002947/2412764‑2413044                                                                                                                                        |                                                                                                                                                   tttGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGCCg                                                                                                                                      <  1:1425021/150‑1 (MQ=255)        ccACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATgg                                                                                                                               >  1:1304361/1‑150 (MQ=255)            gCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGc                                                                                                                           >  1:995039/1‑150 (MQ=255)            gCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGc                                                                                                                           <  1:740594/150‑1 (MQ=255)                 ggCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATCCATGCCCGTc                                                                                                                      <  1:269100/150‑1 (MQ=255)                  gCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCAt                                                                                                                                 <  2:128827/138‑1 (MQ=255)                  gCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCAt                                                                                                                                 >  1:128827/1‑138 (MQ=255)                  gCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATCCATGCCCGTCa                                                                                                                     <  2:1139328/150‑1 (MQ=255)                  gCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATCCATGCCCGTCa                                                                                                                     <  2:1129598/150‑1 (MQ=255)                      gCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGAGGGCCGGCAAgcg                                                                                                                 >  2:1172173/1‑150 (MQ=255)                        aCGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGTTTGCGACTTCAGGAGGCCGAGCGTAGTGCTTGCGAAGGGAGGTGACGGGCATGGATGccc                                                                                                                         <  1:1244143/140‑1 (MQ=255)                        aCGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGccc                                                                                                                         >  2:1244143/1‑140 (MQ=255)                        aCGTCGTTCTGCTTCGGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCt                                                                                                               <  2:260371/150‑1 (MQ=255)                          gtcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            >  1:462793/1‑150 (MQ=255)                          gtcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGATTTTGCTGTTGCTTCTACGGGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            >  2:496590/1‑150 (MQ=255)                           tcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑Ag                                                                                                           >  1:164732/1‑150 (MQ=255)                            cgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCtcccgggagtacgcgctgcaggccccatccatggggcctca                                                                                                           <  2:1408857‑M1/150‑42 (MQ=255)                                  gcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCat                                                                                                    <  2:1304361/150‑1 (MQ=255)                                   cttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatg                                                                                                   >  2:986753/1‑150 (MQ=255)                                        gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg                                                                                              >  1:1041252/1‑150 (MQ=255)                                        gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg                                                                                              <  1:613501/150‑1 (MQ=255)                                        gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg                                                                                              <  1:1172173/150‑1 (MQ=255)                                         cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg                                                                                             <  2:861092/150‑1 (MQ=255)                                         cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg                                                                                             <  1:779464/150‑1 (MQ=255)                                            ctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGc                                                                                           <  2:1069950/150‑1 (MQ=255)                                              gcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTg                                                                                        >  1:1133781/1‑150 (MQ=255)                                               cgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtca                                                                                       <  2:817002/150‑3 (MQ=255)                                                 tctgcttctgctTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCa                                                                                      >  1:1093609/1‑149 (MQ=255)                                                 tctgcttctgctTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCa                                                                                      <  2:1093609/149‑1 (MQ=255)                                                 tctgcttctgctTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAg                                                                                     <  2:1041252/150‑1 (MQ=255)                                                  ctgcttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgc                                                                                    <  2:995039/150‑1 (MQ=255)                                                    gcttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgcgc                                                                                  <  2:535283/150‑1 (MQ=255)                                                     cttctgcgtGTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGcgcg                                                                                 <  1:874472/150‑1 (MQ=255)                                                       tctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATg                                                                                                                                <  2:1172421/102‑1 (MQ=255)                                                       tctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATg                                                                                                                                >  1:1172421/1‑102 (MQ=255)                                                            ttttGCTGTTGCTTCTACGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc                                                                          >  2:837527/1‑150 (MQ=255)                                                            ttttGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTccc                                                                          <  1:381565/150‑1 (MQ=40)                                                               tGCTTTTGCTTGTAAGCGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGAAGGCCGAGCGCAGGGCTTGCgaagggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgcccgtcacctcccttc                                                                        <  2:242732‑M1/150‑77 (MQ=255)                                                                gCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGa                                                                      <  2:1319226/150‑1 (MQ=38)                                                                 cTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAg                                                                     >  2:339497/1‑150 (MQ=38)                                                                   gTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCAt                                                                                                                                 >  1:859553/1‑89 (MQ=255)                                                                   gTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCAt                                                                                                                                 <  2:859553/89‑1 (MQ=255)                                                                    ttGCTTCTACGCGCGCGATAGTTCCGGCGACGCAGATGGCGACCTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGCGACGGGCATGGATGCCCGTCAAGCGCGG‑AGGCCCCATGGATGGGGCCTGCAGCGCGGACTCCCGGGAGCaa                                                                  >  2:381551/1‑150 (MQ=11)                                                                    ttGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAgg                                                                                                                                               <  1:6028/74‑1 (MQ=40)                                                                    ttGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAgg                                                                                                                                               >  2:6028/1‑74 (MQ=255)                                                                    ttGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            >  2:1191718/1‑108 (MQ=38)                                                                    ttGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            <  1:1191718/108‑1 (MQ=38)                                                                          cTAAGTGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCtcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccgcaagccctgc                                                             <  1:399384‑M1/150‑88 (MQ=255)                                                                          cTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCtcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctcccttcgcaagccctgc                                                             <  2:98245‑M1/150‑88 (MQ=255)                                                                               cgcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGa                                                       <  2:1384523/150‑1 (MQ=39)                                                                                gcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg                                                      <  1:1035144/150‑1 (MQ=38)                                                                                gcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg                                                      <  1:1086947/150‑1 (MQ=38)                                                                                gcgcgATAGTTCAGGCGACGCAGATTGAGACTTCAGGAGCTCGAGCGCAGTGTTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCATGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg                                                      <  1:381551/150‑1 (MQ=11)                                                                                 cgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAgg                                                     <  2:462793/150‑1 (MQ=39)                                                                                  gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtcag                                                                                      >  1:1012009/1‑114 (MQ=11)                                                                                  gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtcag                                                                                      <  2:1012009/117‑4 (MQ=11)                                                                                  gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            <  2:168676/94‑1 (MQ=34)                                                                                  gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a                                                                                                            >  1:168676/1‑94 (MQ=34)                                                                                  gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCACCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAggg                                                    >  2:887700/1‑150 (MQ=37)                                                                                    gATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtca                                                                                       <  2:1206848/114‑3 (MQ=11)                                                                                    gATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtca                                                                                       >  1:1206848/1‑112 (MQ=11)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCtcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgccc                                                                                    >  2:946522‑M1/1‑48 (MQ=255)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCtcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgccc                                                                                    <  1:946522‑M1/112‑65 (MQ=255)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcgc                                                                                                                <  1:1265887/84‑1 (MQ=33)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcgc                                                                                                                >  2:1265887/1‑84 (MQ=35)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg                                             >  2:372148/1‑150 (MQ=38)                                                                                         ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg                                             >  2:205525/1‑150 (MQ=39)                                                                                           cAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGa                                           <  1:372148/150‑1 (MQ=39)                                                                                                   gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAgg                                                     <  1:496510/132‑1 (MQ=38)                                                                                                   gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAgg                                                     >  2:496510/1‑132 (MQ=39)                                                                                                      gATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg                                             >  2:1077070/1‑137 (MQ=40)                                                                                                      gATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg                                             <  1:1077070/137‑1 (MQ=40)                                                                                                            gACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg                                                      >  1:997162/1‑122 (MQ=40)                                                                                                            gACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg                                                      <  2:997162/122‑1 (MQ=40)                                                                                                            gACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGACTGCAGCGCGTACTCCCGGGAGCAAGCACGGAGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCg                          >  2:649270/1‑150 (MQ=255)                                                                                                               ttCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgat                       >  2:98960/1‑150 (MQ=38)                                                                                                                 cAGGAGGCCGGGCGTAGGGCTTTCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCACTG‑AGACCACATCGATGGCGCATGCAGCGAGTCCTACCTGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatga                     <  2:386295/150‑1 (MQ=11)                                                                                                                  aggaggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCTCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatgat                    >  1:886494/1‑150 (MQ=38)                                                                                                                      ggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGa                <  1:339497/150‑1 (MQ=38)                                                                                                                          gAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAgcgc            >  2:960817/1‑150 (MQ=40)                                                                                                                                  ggCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCg                                                             >  2:251990/1‑93 (MQ=34)                                                                                                                                  ggCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCg                                                             <  1:251990/93‑1 (MQ=33)                                                                                                                                    cTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt  <  1:986753/150‑1 (MQ=40)                                                                                                                                        |                                                                                                                                                   TTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTT  >  NC_002947/2412764‑2413044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.