New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2924275 =	46 (0.880)	3 (0.060)	3/232	NT	6.0%	coding (1021/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	2924307 =	50 (1.010)					coding (989/2772 nt)	PP_2563	antibiotic biosynthesis protein

AACGGGTTGGCGATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGACCTGCTGA  >  NC_002947/2924127‑2924411                                                                                                                                                     |                                                                                                                                           aaCGGGTTGGCGATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCa                                                                                                                                           <  2:1244404/150‑1 (MQ=255)   cGGGTTGGCGATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAAt                                                                                                                                         <  2:696311/150‑1 (MQ=255)     cctgttctgggggggcgatgcactcagcccgacacagtatcagcaggtccgcgccatcgcaccgaatgccgtcaatgtgaacttctacggcaccaccgaaaccccacaggccatggctttccataccctcgacccggaaatggaCAATGc                                                                                                                                       <  2:1256930‑M1/6‑1 (MQ=255)          gCGATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑Tg                                                                                                                                <  2:52937/150‑1 (MQ=255)            gATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGcc                                                                                                                              <  1:366618/150‑1 (MQ=255)                    tGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCa                                                                                                                      <  2:527402/150‑1 (MQ=255)                        ttCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCg                                                                                                                  >  2:615572/1‑150 (MQ=255)                        ttCGGTCAGCCCCGGGTCGTCCCAGTATAACAGCGACAGGGAGGTGTTGCGGAGCAGGATTTCGCCTTTCGCGCCCTCCCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGTGGACCCg                                                                                                                  >  1:811379/1‑150 (MQ=255)                                          gtcCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCgg                                                                                                <  1:615572/150‑1 (MQ=255)                                              agcaggtccgcgccatcgcaccgaatgccgtcaatgtgaacttctacggcaccaccgaaaccccacaggccatggctttccataccctcgacccggaaatggaCAATGCCtt                                                                                                                                    <  2:874217‑M1/9‑1 (MQ=255)                                              agcaggtccgcgccatcgcaccgaatgccgtcaatgtgaacttctacggcaccaccgaaaccccacaggccatggctttccataccctcgacccggaaatggaCAATGCCtt                                                                                                                                    >  1:874217‑M1/104‑112 (MQ=255)                                                 tATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAgg                                                                                         <  2:811379/150‑1 (MQ=255)                                                      ccGCGACAGGTAGGGGTTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATg                                                                                    >  2:876823/1‑150 (MQ=255)                                                      ccGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATg                                                                                    >  2:961005/1‑150 (MQ=255)                                                          gACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGaaa                                                                                <  2:480903/150‑1 (MQ=255)                                                          gACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGaaa                                                                                <  1:1042281/150‑1 (MQ=255)                                                              ggTCGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCa                                                                            >  2:55235/1‑150 (MQ=255)                                                              ggTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTcc                                                                                                        >  2:856899/1‑122 (MQ=255)                                                              ggTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTcc                                                                                                        <  1:856899/122‑1 (MQ=255)                                                               gTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCAt                                                                           >  2:679153/1‑150 (MQ=255)                                                                  ggggCTGCGGATCAGGATTTCGCCTGTCTCGCCTTTTCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGc                                                                        <  2:1182061/150‑1 (MQ=255)                                                                          ggATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAACCCCTCGCCTTTgggg                                                                >  2:8748/1‑150 (MQ=255)                                                                                ggATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCgg                                                          <  1:55235/150‑1 (MQ=255)                                                                                 gtgaacttctacggcaccaccgaaaccccacaggccatggctttccataccctcgacccggaaatggaCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTc                                                                                                         >  1:148253‑M1/69‑102 (MQ=255)                                                                                 gtgaacttctacggcaccaccgaaaccccacaggccatggctttccataccctcgacccggaaatggaCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTc                                                                                                         <  2:148253‑M1/34‑1 (MQ=255)                                                                                 gATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCGATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGGCGAGGGTATGGAAAGCCATGGCCTGCGGGGTTTCggt                                                         >  2:191475/1‑150 (MQ=255)                                                                                 gATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCagt                                                         >  1:241655/1‑150 (MQ=255)                                                                                  aTTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCggtg                                                        <  1:876823/150‑1 (MQ=255)                                                                                    ttCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCggtggt                                                      <  1:346875/150‑1 (MQ=255)                                                                                         cTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGt                                                 >  1:772898/1‑150 (MQ=255)                                                                                              tcGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAg                                            >  2:1381695/1‑150 (MQ=255)                                                                                                 cccTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTc                                         >  2:745464/1‑150 (MQ=255)                                                                                                    tCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTcaca                                      >  1:1256930/1‑150 (MQ=255)                                                                                                        tGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACAtt                                    <  2:500802/148‑1 (MQ=255)                                                                                                        tGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACAtt                                    >  1:500802/1‑148 (MQ=255)                                                                                                          aCCAGCTGGTTGGACGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACg                                <  1:649049/150‑1 (MQ=255)                                                                                                                  gTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCgg                        >  1:847084/1‑150 (MQ=255)                                                                                                                        cGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTAACGGCATTCGGTGCGAt                  >  2:286307/1‑150 (MQ=255)                                                                                                                        cGGGTTTATCACCAGCAATTGTGCATAGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACg                                <  1:861177/136‑1 (MQ=255)                                                                                                                        cGGGTTTATCACCAGCAATTGTGCATAGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACg                                >  2:861177/1‑136 (MQ=255)                                                                                                                             ttATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAggg                                                                                        >  2:489724/1‑75 (MQ=255)                                                                                                                             ttATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAggg                                                                                        <  1:489724/75‑1 (MQ=255)                                                                                                                             ttATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGgcgc             <  2:772898/150‑1 (MQ=255)                                                                                                                               aTCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTa                                                                                      >  2:310423/1‑75 (MQ=255)                                                                                                                               aTCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTa                                                                                      <  1:310423/75‑1 (MQ=255)                                                                                                                                taccctcgacccggaaatggaCAATGCCCGGGTGCCCTTGGGCAAA‑‑GGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGa          <  2:452739‑M1/129‑1 (MQ=255)                                                                                                                                tCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGa          >  1:980207/1‑150 (MQ=255)                                                                                                                                   ccAGCAATTGTGCATCGGCAATGGCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCggt                                                         <  1:95407/100‑1 (MQ=255)                                                                                                                                   ccAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCggt                                                         >  2:95407/1‑100 (MQ=255)                                                                                                                                   ccAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGACct       <  2:980207/150‑1 (MQ=255)                                                                                                                                    cAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAg                                                                                          >  1:993685/1‑66 (MQ=255)                                                                                                                                    cAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAg                                                                                          <  2:993685/66‑1 (MQ=255)                                                                                                                                     aGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGACctgc     <  2:847084/150‑1 (MQ=255)                                                                                                                                        aaTTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCAACTGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGACCTGCTGa  <  1:8748/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                           AACGGGTTGGCGATGAATTTGGCTTCGGTCAGCCCCGGGTCGTCCCAGTATCCCCGCGACAGGTAGGGGCTGCGGATCAGGATTTCGCCTGTCTCGCCCTCGCTGACCAGCTGGTTGGCCGGGTTTATCACCAGCAATTGTGCATCGGCAATGCCTT‑‑TGCCCAAGGGCACCCGGGCATTGTCCATTTCCGGGTCGAGGGTATGGAAAGCCATGGCCTGTGGGGTTTCGGTGGTGCCGTAGAAGTTCACATTGACGGCATTCGGTGCGATGGCGCGGACCTGCTGA  >  NC_002947/2924127‑2924411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.