New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3673224 = | 51 (0.970) | 4 (0.080) | 4/238 | NT | 7.5% | coding (229/891 nt) | PP_3237 | universal stress protein family protein |
? | NC_002947 | 3673245 = | 49 (0.960) | coding (250/891 nt) | PP_3237 | universal stress protein family protein |
GGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCA > NC_002947/3673076‑3673371 | ggCCCGACCAGCAGCGGCTAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCt < 2:659016/150‑1 (MQ=255) cGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGt < 2:6056/150‑1 (MQ=255) gCATCGGCCAGCTTGCACATTGTCGCCTCCCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTcc < 1:361132/150‑1 (MQ=255) tCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGc < 1:1203769/150‑1 (MQ=255) cTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGt > 1:1190425/1‑150 (MQ=255) ttGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTg > 2:851918/1‑150 (MQ=255) gCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGCGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTgac > 2:534810/1‑150 (MQ=255) aagaaggcgcgcttgagcgcgggctcatgctcgacctgcttgagcagcaggtccggtcgcatctccatgacgtgttccaggatgtcatcctgcaggtcattgctccacgccacctcggtcgtcacCTGCGTGCCTCCGGCGTGCAGGTga > 1:1192974‑M1/126‑150 (MQ=255) acaTTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTgacga > 1:846928/1‑150 (MQ=255) acaTTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTgacga > 2:185250/1‑150 (MQ=255) tCGAAGCACTGGACAAACTGTTGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGa < 1:433415/150‑1 (MQ=255) gAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGc > 2:1011095/1‑150 (MQ=255) gAAGCACTGGACAAACTCTGGCTACTGGAATCACGTAAGAGATCGNA‑NGAGCACACGTCTTACCGGCACACANGGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGc > 1:247623/1‑150 (MQ=255) aaGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCa > 2:1204589/1‑150 (MQ=255) gCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAAt < 1:185250/150‑1 (MQ=255) gCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAAt < 2:1377291/150‑1 (MQ=255) cTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGAc > 2:1304763/1‑150 (MQ=255) aaaCTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAg > 1:1041614/1‑150 (MQ=255) aaCTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAgg > 1:1172072/1‑150 (MQ=255) tACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCCGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATcc > 2:551494/1‑150 (MQ=255) tACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATcc > 2:1318043/1‑150 (MQ=255) gatctggccGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGTCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTg < 1:1301829/143‑1 (MQ=255) tGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGCGGCCTGGAGCAATGACCTGCAGGATCACATCCTgg > 1:226253/1‑150 (MQ=255) gAGTCCGGTAAG‑CACCAAGCGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAGCCCAGGCGAACGCGCTGCGCGCCTCCGGCGTGTAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGTCATCCTgcag < 1:534810/150‑4 (MQ=255) tCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGAAGACCGAGGAGGCGGGGAGCAAGTTCCTGCAGGATGACATCCTgaagacc > 2:1301829/1‑144 (MQ=255) ggTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGaa < 1:193167/144‑1 (MQ=255) ggTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGaa > 2:193167/1‑144 (MQ=255) aaG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATg < 1:851918/150‑1 (MQ=255) ccAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGAt > 2:874936/1‑150 (MQ=255) cGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGAc < 1:874936/150‑1 (MQ=255) gCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGt < 1:293730/61‑1 (MQ=255) gCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGt > 2:293730/1‑61 (MQ=255) cGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGAc < 2:1041614/150‑1 (MQ=255) gCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACctgctg < 2:846928/150‑1 (MQ=255) ttACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACg > 2:719760/1‑122 (MQ=255) ttACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACg < 1:719760/122‑1 (MQ=255) ttACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTgctgct > 1:598663/1‑150 (MQ=255) tCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTc > 2:119466/1‑148 (MQ=255) tCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTc < 1:119466/148‑1 (MQ=255) gcaACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGa < 1:1304763/150‑1 (MQ=255) aaCAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCCCAAGCAGGTCGAGCATGAGc < 1:1204589/150‑1 (MQ=255) gCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCAt < 1:330882/142‑1 (MQ=255) gCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCAt > 2:330882/1‑142 (MQ=255) cTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCcgcg > 2:1101833/1‑150 (MQ=255) tGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAg < 1:366613/131‑1 (MQ=255) tGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAg > 2:366613/1‑131 (MQ=255) acgccacctcggtcgtcacCTGCACGCCGGAGGCACGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCgcgc < 2:923226‑M1/130‑1 (MQ=255) acgccacctcggtcgtcacCTGCACGCCGGAGGCACGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCgcgc > 1:923226‑M1/20‑149 (MQ=255) gAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGCCCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTc > 1:837849/1‑150 (MQ=255) aaaCCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCa > 2:1396345/1‑150 (MQ=255) ccacctcggtcgtcacCTGCACGCCGGAGGCACGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCaa > 1:305929‑M1/17‑150 (MQ=255) cccAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAgc > 1:1103730/1‑150 (MQ=255) ccAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGgag < 2:541677/97‑1 (MQ=255) ccAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGgag > 1:541677/1‑97 (MQ=255) cGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTTGAgcgcgggc < 1:551494/150‑4 (MQ=255) aaCGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGAACTGCTGCTCAAGCAAGTCGCGCATGAGCCCGCGCTCAAGCGCGCcttc < 1:1101833/150‑1 (MQ=255) aCGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGa > 2:57706/1‑95 (MQ=255) aCGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGa < 1:57706/95‑1 (MQ=255) cgcTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCa > 1:138401/1‑150 (MQ=255) | GGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAG‑CACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCGCTGCGTGCCTCCGGCGTGCAGGTGACGACCGAGGTGGCGTGGAGCAATGACCTGCAGGATGACATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCA > NC_002947/3673076‑3673371 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |