New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 395114132 (0.610)8 (0.200) 8/190 NT 21.7% intergenic (‑61/+134) PP_3486/PP_3487 cytochrome c/hypothetical protein
?NC_002947 = 3951201 33 (0.810)intergenic (‑121/+74) PP_3486/PP_3487 cytochrome c/hypothetical protein

CTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCA  >  NC_002947/3950992‑3951288
                                                                                                                                                     |                                                                                                                                                     
cTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCGGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGG                                                                                                                                                       >  2:1194508‑M1/1‑150 (MQ=255)
          cGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagc                                                                                                                                             <  1:228721‑M1/150‑11 (MQ=255)
                 gcgGTAAAGGCGTTTGCCTGCTTGTTCGTACTAGGTCGCATTCTGTGCCTGGGGTTAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCg                                                                                                                                      <  1:1385234/150‑1 (MQ=37)
                       aaGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTg                                                                                                                                <  1:378969/150‑1 (MQ=255)
                                  cTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGccc                                                                                                                                        <  1:494078/131‑1 (MQ=255)
                                  cTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGccc                                                                                                                                        >  2:494078/1‑131 (MQ=255)
                                            gTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAagag                                                                                                          <  2:324906/150‑1 (MQ=255)
                                                        gTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcg                                                                                               >  2:1101686‑M1/1‑94 (MQ=255)
                                                           cagggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgcgc                                                                                          >  2:298156/1‑150 (MQ=255)
                                                             gggCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTc                                                                                        >  1:1409804‑M2/1‑149 (MQ=255)
                                                                   gggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcctacctttccgcgcttgagctgctactgccggggctgctgcgcagccctttcg                                                                                    <  2:1268714‑M1/150‑68 (MQ=255)
                                                                    ggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgc                                                                                 >  1:1194508‑M2/1‑142 (MQ=255)
                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgac                                                                                <  1:1035590‑M1/150‑72 (MQ=255)
                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgac                                                                              >  1:1016247‑M2/1‑139 (MQ=255)
                                                                         aGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccc                                                                                         >  1:664373‑M1/1‑77 (MQ=255)
                                                                         aGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccc                                                                                         <  2:664373‑M1/139‑63 (MQ=255)
                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaa                                                                          >  1:666047‑M2/1‑135 (MQ=255)
                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaa                                                                          <  1:504718‑M2/150‑16 (MQ=255)
                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCCGCAGTGGCAGCTAAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaa                                                                          <  1:632091‑M2/150‑16 (MQ=255)
                                                                                 gTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcgaggccgc                                                                    >  2:1086989‑M2/1‑129 (MQ=255)
                                                                                  ttGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCAAAAGGGCTGCGCAGCAGCCCCGGCAGTgg                                                                                                                               <  1:124288/92‑1 (MQ=255)
                                                                                  ttGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCAAAAGGGCTGCGCAGCAGCCCCGGCAGTgg                                                                                                                               >  2:124288/1‑92 (MQ=255)
                                                                                       atgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccac                                                              <  1:731534‑M2/150‑28 (MQ=255)
                                                                                            aaGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAg                                                         >  2:646748/1‑150 (MQ=255)
                                                                                             aGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGc                                                        <  1:646748/150‑1 (MQ=255)
                                                                                                aCGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAgcgcgca                                                                                               <  1:1187044/109‑4 (MQ=255)
                                                                                                aCGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAgcgcgca                                                                                               >  2:1187044/1‑106 (MQ=255)
                                                                                                 cgatcttAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                    <  1:311469/144‑1 (MQ=255)
                                                                                                  gCACGTAAGCCATATCGCAAGCCCTGCGGGAACTGCCTTGCGGGTGGAAAGAGCTGCGCAGCCACCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTCCGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATg                                                   >  2:877116/1‑150 (MQ=37)
                                                                                                        aaGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGACGACAGAGGGGAACGATGCCCGACCCTTTCGCAACGCAACGCCGCTCCCACCAAAGCGGATgagatcg                                             >  2:311469/1‑144 (MQ=37)
                                                                                                         aGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACaga                                            <  1:298156/150‑1 (MQ=255)
                                                                                                           ccATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCCCAGAgg                                          >  2:891731/1‑150 (MQ=255)
                                                                                                           ccATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAgg                                          >  1:481243/1‑150 (MQ=255)
                                                                                                            cATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgca                                                                                             <  1:1232103‑M1/100‑59 (MQ=255)
                                                                                                            cATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgca                                                                                             >  2:1232103‑M1/1‑42 (MQ=255)
                                                                                                            cATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAaga                                                                                                            <  2:1350912/85‑1 (MQ=255)
                                                                                                            cATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAaga                                                                                                            >  1:1350912/1‑85 (MQ=255)
                                                                                                               atCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCaa                                      <  2:481243/150‑1 (MQ=255)
                                                                                                                       cccTGGGGGAGCGGCCTTGGGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCa                               <  2:250342/150‑1 (MQ=255)
                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGGGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGGAGGATCAGAGACTTCCTGCCGACGCTAGGCCGCGCCCACAAAAGCGGCCGCCACCGAGGCCAATGCCCCAggc                            >  1:1236779/1‑150 (MQ=19)
                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                    <  2:657317/126‑1 (MQ=255)
                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                    <  1:343413/126‑1 (MQ=255)
                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                    >  2:343413/1‑126 (MQ=255)
                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                    >  1:657317/1‑126 (MQ=255)
                                                                                                                           gtgGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcat                            <  1:731534‑M1/150‑124 (MQ=255)
                                                                                                                            tgGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgac                                                                              <  1:1389874‑M2/97‑12 (MQ=255)
                                                                                                                            tgGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgac                                                                              >  2:1389874‑M2/1‑86 (MQ=255)
                                                                                                                                 gCGGCCTCGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaac                      >  2:1086989‑M1/1‑21 (MQ=255)
                                                                                                                                      cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt               >  2:1270720/1‑150 (MQ=255)
                                                                                                                                      cTTGCGGCGCGAAATGGCTGCGGAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt               >  2:1307257/1‑150 (MQ=255)
                                                                                                                                       ttGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgctttagctgccactgcgggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgac                <  1:632091‑M1/150‑136 (MQ=255)
                                                                                                                                       ttGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgac                >  1:666047‑M1/1‑15 (MQ=255)
                                                                                                                                       ttGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgac                <  1:504718‑M1/150‑136 (MQ=255)
                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCCAGCATGAAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTc              >  1:969453/1‑150 (MQ=255)
                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGATGGCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTc              >  1:660555/1‑150 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca            >  1:1016247‑M1/1‑11 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctccca                                                                 >  2:1389874‑M1/1‑11 (MQ=255)
                                                                                                                                           gTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctccca                                                                 <  1:1389874‑M1/97‑87 (MQ=255)
                                                                                                                                           gTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca          <  1:1035590‑M2/150‑80 (MQ=255)
                                                                                                                                              gcgAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagcc         >  1:1194508‑M1/1‑8 (MQ=255)
                                                                                                                                               cgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgaccg      >  1:607421/1‑150 (MQ=255)
                                                                                                                                               cgAAAGGGCTGCGCAGCAGCCCCGGCAGTAGCAGCTCAAGCGCGGAAAGGTAGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccc      <  2:1268714‑M2/150‑84 (MQ=255)
                                                                                                                                                    gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacct            >  1:664373‑M2/1‑62 (MQ=255)
                                                                                                                                                    gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacct            <  2:664373‑M2/139‑78 (MQ=255)
                                                                                                                                                     gagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccc  >  1:1409804‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCA  >  NC_002947/3950992‑3951288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.