New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4094693	52 (0.990)	4 (0.080)	4/222	NT	7.3%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	54 (1.140)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator

TGCCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCATGCGCATGGCCA  >  NC_002947/4094549‑4094842                                                                                                                                                 |                                                                                                                                                      tgcCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGGCAGTGTAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTcg                                                                                                                                                  >  2:595908/1‑150 (MQ=255)                     ggCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACa                                                                                                                              >  2:781697/1‑150 (MQ=255)                     ggCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACa                                                                                                                              >  1:144488/1‑150 (MQ=255)                       cAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAgg                                                                                                                            <  2:1166480/150‑1 (MQ=255)                       cAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAgg                                                                                                                            <  1:438117/150‑1 (MQ=255)                                          cggTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaa                                                                                                         <  2:385810‑M1/150‑47 (MQ=255)                                           ggTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGTTTCTACAGGTGGATCTTGCCCGCCAAGag                                                                                                        <  2:74658‑M2/150‑3 (MQ=255)                                            gTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaagg                                                                                                       <  2:718678‑M1/150‑49 (MQ=255)                                               ggTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggcca                                                                                                    >  1:781697‑M2/1‑144 (MQ=255)                                                gTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccag                                                                                                   <  1:1012252‑M2/150‑8 (MQ=255)                                                gTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccag                                                                                                   <  1:1011943‑M2/150‑8 (MQ=255)                                                  gAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGTCTTTTCTTCCTAGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagta                                                                                                 >  1:811351‑M2/1‑141 (MQ=255)                                                  gAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagta                                                                                                 >  1:342774‑M2/1‑141 (MQ=255)                                                     cGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagtacag                                                                                              <  1:1164964‑M2/150‑13 (MQ=255)                                                      ggTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAgg                                                                                             >  2:205626/1‑150 (MQ=255)                                                       gTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGgc                                                                                            <  1:82457/150‑1 (MQ=255)                                                       gTCAGTGGAGTGACGGGGCGATCTGACTATTTGCCAGAAACAGGAAAGCACTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCACGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGgc                                                                                            >  1:422552/1‑150 (MQ=255)                                                        tCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGTCTGTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGgca                                                                                           <  1:640373/150‑1 (MQ=255)                                                        tCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAag                                                                                                          >  2:967162/1‑135 (MQ=255)                                                        tCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAag                                                                                                          <  1:967162/135‑1 (MQ=255)                                                              gAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAgg                                                                                             >  2:926596/1‑142 (MQ=255)                                                              gAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAgg                                                                                             <  1:926596/142‑1 (MQ=255)                                                                gTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGc                                                                                   <  1:595908/150‑1 (MQ=255)                                                                 tGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCt                                                                                  >  2:1089596/1‑150 (MQ=255)                                                                  gACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCtt                                                                                 >  1:1010463/1‑150 (MQ=255)                                                                     ggggCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAggg                                                                                                                           <  1:514628/105‑1 (MQ=255)                                                                     ggggCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAggg                                                                                                                           >  2:514628/1‑105 (MQ=255)                                                                       ggCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGt                                                                            <  2:144488/150‑1 (MQ=255)                                                                           aTCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCt                                                                        <  2:117569/150‑1 (MQ=255)                                                                             tttaCTGTTCGCCATAAACAGGAAAGCCCTGCGCACGGCGGCTCGTTTCTTTTTTGACTGTACTGCCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCNTGCCCGCGANGAGGCCAGNACAGGCAGCAAAGGCTTCAGGTTCCttn                                                                      <  1:660515/147‑2 (MQ=255)                                                                                tcTGGTTGCCCGAAACAGGAAAGCCCTGCGCACGGCGGGTCTTTTATTTTTTGACTGTACTGGCATTTGCGCGGGCATCCCCGCTTCGACAGGGCTATCTTGNCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTgcgc                                                                   <  1:527702/149‑1 (MQ=255)                                                                                aCTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTgcgc                                                                   <  1:897426/150‑1 (MQ=255)                                                                                aCTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTgcgc                                                                   <  1:205626/150‑1 (MQ=255)                                                                                aCTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCCGGCAAGCCCGCTTCGACAGGGATCGCAACCCTGCGAAGAGGCCAGTACACGCAGCAAAGGCTTCAGGTGCCTTgctc                                                                   >  1:1156327/1‑148 (MQ=255)                                                                                  tGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGgcag                                                                                          <  1:1145653/125‑1 (MQ=255)                                                                                  tGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGgcag                                                                                          >  2:1145653/1‑125 (MQ=255)                                                                                  tGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCtt                                                                 >  1:219844/1‑150 (MQ=255)                                                                                    gTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCa                                                               >  2:330880/1‑150 (MQ=255)                                                                                     ttGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggcca                                                                                                    <  1:520263‑M1/112‑52 (MQ=255)                                                                                     ttGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggcca                                                                                                    >  2:520263‑M1/1‑61 (MQ=255)                                                                                         cAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAgccgc                                                          >  1:1378934/1‑150 (MQ=255)                                                                                          aGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAgccgcc                                                         >  2:964534/1‑150 (MQ=255)                                                                                          aGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAATACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAgccgcc                                                         <  2:1409084/150‑1 (MQ=255)                                                                                           gAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATTTTGGCCGCCAAGAGGCCAGTACAGGGAGCAACGGCTTCAGGTTCCGTGCGCTTCAGCCGCCt                                                        >  1:182330/1‑150 (MQ=255)                                                                                            aaaCAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTc                                                       >  2:1294905/1‑150 (MQ=255)                                                                                                aGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGGAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATgc                                                   >  2:311225/1‑150 (MQ=255)                                                                                                aGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggc                                                                                                      <  1:807357‑M2/99‑5 (MQ=255)                                                                                                aGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggc                                                                                                      >  2:807357‑M2/1‑95 (MQ=255)                                                                                                 ggAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATgcg                                                  <  2:1164964/150‑1 (MQ=255)                                                                                                 ggAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATgcg                                                  >  1:458349/1‑150 (MQ=255)                                                                                                  gAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCTACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCtt                                                                                 <  1:1201395/118‑1 (MQ=255)                                                                                                  gAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCtt                                                                                 >  2:1201395/1‑118 (MQ=255)                                                                                                  gAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATgcgc                                                 <  1:330880/150‑1 (MQ=255)                                                                                                  gAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATgcgc                                                 <  1:419644/150‑1 (MQ=255)                                                                                                    aaGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGCCAGGGGCAGCTTGCCCGCGAAGAGTCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCt                                               <  1:1242210/150‑1 (MQ=255)                                                                                                            cgcACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAg                                       >  2:332628/1‑150 (MQ=255)                                                                                                             gcACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAgc                                      >  2:344718/1‑150 (MQ=255)                                                                                                               aCGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCgg                                                                                                                                               <  2:814444/43‑1 (MQ=255)                                                                                                               aCGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCgg                                                                                                                                               >  1:814444/1‑43 (MQ=255)                                                                                                                         ttttcttttTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGt                          >  2:696787/1‑150 (MQ=255)                                                                                                                          tttcttttTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGtt                         >  2:5459/1‑150 (MQ=255)                                                                                                                           ttcttttTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTg                        <  1:696787/150‑1 (MQ=255)                                                                                                                             cttttTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCt                      <  1:768220/150‑1 (MQ=255)                                                                                                                                      cTGTACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccg             <  1:1164964‑M1/150‑139 (MQ=255)                                                                                                                                       tGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCATg            >  2:811823/1‑150 (MQ=255)                                                                                                                                         tACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtctaggaagaaaagacccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttc          >  1:811351‑M1/1‑9 (MQ=255)                                                                                                                                         tACTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttc          >  1:342774‑M1/1‑9 (MQ=255)                                                                                                                                          aCTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCa              <  1:1202893/145‑1 (MQ=255)                                                                                                                                          aCTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCa              >  2:1202893/1‑145 (MQ=255)                                                                                                                                           cTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcac        <  1:1011943‑M1/150‑144 (MQ=255)                                                                                                                                           cTGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcac        <  1:1012252‑M1/150‑144 (MQ=255)                                                                                                                                            tGGCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcacc       >  1:781697‑M1/1‑6 (MQ=255)                                                                                                                                            tGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaa                                             <  1:520263‑M2/112‑62 (MQ=255)                                                                                                                                            tGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaa                                             >  2:520263‑M2/1‑51 (MQ=255)                                                                                                                                              gCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcct                                                        <  1:807357‑M1/99‑96 (MQ=255)                                                                                                                                              gCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcct                                                        >  2:807357‑M1/1‑4 (MQ=255)                                                                                                                                              gCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaa                                                                                                         >  1:254462‑M1/1‑4 (MQ=255)                                                                                                                                              gCCTcttcgcgggcaagatagccctgtcgaagcgggcttgcccgcgaaaa                                                                                                         <  2:254462‑M1/50‑47 (MQ=255)                                                                                                                                              gCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCATgc           <  2:532223/144‑1 (MQ=255)                                                                                                                                              gCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTAAAGGCAGCAAAGGCATCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCATgc           >  1:532223/1‑144 (MQ=255)                                                                                                                                              gCCTTTTCGCGGGCAAGCCCGCTTCAACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCCTGCGCCCGGCGCAAGCGCTAGCGGCTGTTGCTCCGCGGCATTCGGATgt     <  2:1156327/150‑2 (MQ=255)                                                                                                                                               ccTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcaccaac    <  2:718678‑M2/150‑103 (MQ=255)                                                                                                                                                ctcttggcgggcaagatccacctgtagaaacgggcttgcccgcgaaaaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcaccaacc   <  2:74658‑M1/150‑149 (MQ=255)                                                                                                                                                 ttttCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggccagtacagtcaaaaaagaaaagccccgccgtgcgcagggctttcctgtttctggcaaccagtcagatcgccccgtcactccactgaccgttcaccaaccg  <  2:385810‑M2/150‑105 (MQ=255)                                                                                                                                                 ttttCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggc                                                                                                      <  2:254462‑M2/50‑5 (MQ=255)                                                                                                                                                 ttttCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGaggc                                                                                                      >  1:254462‑M2/1‑46 (MQ=255)                                                                                                                                                 |                                                                                                                                                      TGCCTGAGGCACTGCGCGACGGCAACCCGCTGGGGCTGCGGCGGTTGGTGAACGGTCAGTGGAGTGACGGGGCGATCTGACTGGTTGCCAGAAACAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCGCCTGGCGCAAGCGCTCGCGGCTGTTGCTCAGGTGCATGCGCATGGCCA  >  NC_002947/4094549‑4094842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.