New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4335686 =	39 (0.740)	3 (0.060)	3/240	NT	7.7%	coding (127/222 nt)	PP_3808	antibiotic synthesis protein MbtH
	?	NC_002947	4335714 =	34 (0.660)					coding (99/222 nt)	PP_3808	antibiotic synthesis protein MbtH

TGTAGACCATGGCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTCATTGCCTGTCTCCTTAAATGATGAT  >  NC_002947/4335537‑4335835                                                                                                                                                      |                                                                                                                                                      tGTAGACCATGGCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAg                                                                                                                                                       <  2:436249/150‑1 (MQ=255)     gACCATGGCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAAACGTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCg                                                                                                                                                   >  1:233671/1‑150 (MQ=255)        cATGGCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCtt                                                                                                                                                >  1:927282/1‑150 (MQ=255)           ggCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTg                                                                                                                                             <  1:200551/150‑1 (MQ=255)             cgcTGGCCCCGGAGTGCGGCAGGCACAGCAGGTGCAGCACGGGCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCAGCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGcc                                                                                                                                           <  2:505543/150‑1 (MQ=255)                tGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGGGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCAc                                                                                                                                        <  1:940695/150‑1 (MQ=255)                tGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCAc                                                                                                                                        >  1:1284906/1‑150 (MQ=255)                   ccccGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGc                                                                                                                                     >  2:1366944/1‑150 (MQ=255)                    cccGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCt                                                                                                                                    >  1:90415/1‑150 (MQ=255)                            aCGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCgccagcc                                                                                                                            >  2:257877/1‑150 (MQ=255)                                caggcaCAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTg                                                                                                                        <  2:225564/150‑1 (MQ=255)                                 aggcaCAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTgg                                                                                                                       <  1:1366944/150‑1 (MQ=255)                                    ttaaggagacaggaaatgacttccgttttcgaccgcgacgatatccagttccaggtagtggtcaaccacgaagagcaatactcgatctggcccgactacaaagccatccccaatGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGa                                                                                                                    >  1:649496‑M1/115‑150 (MQ=255)                                     acaGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGAt                                                                                                                   <  2:1089083/150‑1 (MQ=255)                                     acaGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGAt                                                                                                                   >  2:202028/1‑150 (MQ=255)                                      cagcagGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATg                                                                                                                  <  1:150866/150‑1 (MQ=255)                                         cagGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGAAGGCTCATCATGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCt                                                                                                               >  2:1415994/1‑150 (MQ=255)                                                aGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGt                                                                                                        <  2:1155291/150‑1 (MQ=255)                                                 gCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTc                                                                                                       >  2:1092974/1‑150 (MQ=255)                                                         aCTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGa                                                                                               >  1:832582/1‑150 (MQ=255)                                                                 gcAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTAt                                                                                       <  1:1416778/150‑1 (MQ=255)                                                                  cAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTAtt                                                                                      <  2:832582/150‑1 (MQ=255)                                                                               tttCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGtt                                                                         <  1:1092974/150‑1 (MQ=255)                                                                                  cTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGAc                                                                      <  2:1284906/150‑1 (MQ=255)                                                                                         ggtagtggtcaaccacgaagagcaatactcgatctggcccgactacaaagccatccccaatGGCCGCTTTTGCCCACGGCTCGCCAGCCATTgg                                                                                                                       >  1:565678‑M1/62‑94 (MQ=255)                                                                                         ggtagtggtcaaccacgaagagcaatactcgatctggcccgactacaaagccatccccaatGGCCGCTTTTGCCCACGGCTCGCCAGCCATTgg                                                                                                                       <  2:565678‑M1/33‑1 (MQ=255)                                                                                          ggCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCt                                                              <  2:90415/150‑1 (MQ=255)                                                                                           gCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTg                                                             <  1:257877/150‑1 (MQ=255)                                                                                           gCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTCCGTGGTTGACCACTACCTg                                                             >  2:1061248/1‑150 (MQ=255)                                                                                               aGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTggg                                                                                                                      >  2:1269204/1‑89 (MQ=255)                                                                                               aGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTggg                                                                                                                      <  1:1269204/89‑1 (MQ=255)                                                                                                gCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACt                                                        <  1:202028/150‑1 (MQ=255)                                                                                                 cGGGCGCATGTCGGTCCAGGCTTCATCGAGGGAGGGCAGGCAGGCCTTCTTCAGGCCGGTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTg                                                       <  2:53234/150‑1 (MQ=255)                                                                                                           tCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGa                                                                                           <  1:323038/104‑1 (MQ=255)                                                                                                           tCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGa                                                                                           >  2:323038/1‑104 (MQ=255)                                                                                                              gTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCGGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCgg                                          >  2:893034/1‑150 (MQ=255)                                                                                                                    aCTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGt                                         <  2:191048/145‑1 (MQ=255)                                                                                                                    aCTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGt                                         >  1:191048/1‑145 (MQ=255)                                                                                                                        cATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACgg                                <  2:927282/150‑1 (MQ=255)                                                                                                                             aTGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTc                           >  1:814232/1‑150 (MQ=255)                                                                                                                                   gCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTg                                                                            >  2:301227/1‑95 (MQ=255)                                                                                                                                   gCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTg                                                                            <  1:301227/95‑1 (MQ=255)                                                                                                                                   gCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTCATTGcc                     >  1:1011329/1‑150 (MQ=255)                                                                                                                                       ggCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTCATTGCCTGtc                 >  1:694914/1‑150 (MQ=255)                                                                                                                                                     aGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGt                                         <  1:317208/112‑1 (MQ=255)                                                                                                                                                     aGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGt                                         >  2:317208/1‑112 (MQ=255)                                                                                                                                                      GGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTCATTGCCTGTCTCCTTAAatgatgat  >  2:694914‑M1/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TGTAGACCATGGCGCTGGCCCCGGAGTACGGCAGGCACAGCAGGTTCAGCACGGTCACTGGGCGGCAGCTTCGGCCATTTTCTGGCGCAGGCTCAGCGGGCGCATGTCGGTCCAGACTTCATCGATGTAGGCCAGGCAGTCCTTCTTCAGGCCGCTTTTGCCCACGGCTCGCCAGCCATTGGGGATGGCTTTGTAGTCGGGCCAGATCGAGTATTGCTCTTCGTGGTTGACCACTACCTGGAACTGGATATCGTCGCGGTCGAAAACGGAAGTCATTGCCTGTCTCCTTAAATGATGAT  >  NC_002947/4335537‑4335835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.