New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4516942	57 (1.080)	5 (0.100)	5/236	NT	8.4%	intergenic (+55/‑47)	ate/infA	arginyl‑tRNA‑‑protein transferase/translation initiation factor IF‑1
	?	NC_002947	= 4516956	55 (1.090)					intergenic (+69/‑33)	ate/infA	arginyl‑tRNA‑‑protein transferase/translation initiation factor IF‑1

CTGGATCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACGGGCACGTCGTAACCGC  >  NC_002947/4516797‑4517089                                                                                                                                                  |                                                                                                                                                    cTGGATCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGc                                                                                                                                                 <  1:6976/150‑1 (MQ=255)      tCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGata                                                                                                                                            >  2:1177138/1‑150 (MQ=255)      tCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGata                                                                                                                                            <  1:643848/150‑1 (MQ=255)      tCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGata                                                                                                                                            >  1:593984/1‑150 (MQ=255)       cAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGatat                                                                                                                                           >  1:1183979/1‑150 (MQ=255)               gCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGacgcatatccgcaccggg                                                                                                                                   >  2:59374‑M1/1‑132 (MQ=255)                 aagaagATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCt                                                                                                                                 >  1:104684/1‑150 (MQ=255)                   gaagaTGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTaa                                                                                                                               >  2:1264523/1‑150 (MQ=255)                      gaTGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGacgcatatccgcaccgggcaaaaaa                                                                                                                            <  1:1218798‑M1/150‑26 (MQ=255)                      gaTGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACAt                                                                                                                            <  2:817574/150‑1 (MQ=255)                       aTGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACAtt                                                                                                                           <  2:593984/150‑1 (MQ=255)                       aTGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACAtt                                                                                                                           >  1:140379/1‑150 (MQ=255)                         gAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGt                                                                                                                                       <  1:153614/136‑1 (MQ=255)                         gAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGt                                                                                                                                       >  2:153614/1‑136 (MQ=255)                         gAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTCAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTgg                                                                                                                         <  1:617320/150‑1 (MQ=255)                          aaCTACAAGACGCAGTACCGACCTATCGAGCTGCTTATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACAtt                                                                                                                           <  1:1026233/147‑1 (MQ=255)                          aaCTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACAtt                                                                                                                           >  2:1026233/1‑147 (MQ=255)                             tACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATcc                                                                                                                     >  1:60951/1‑150 (MQ=255)                             tACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATcc                                                                                                                     >  1:927918/1‑150 (MQ=255)                              aCAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCg                                                                                                                    >  1:1238616/1‑150 (MQ=255)                               cAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGa                                                                                                                   <  2:193970/150‑1 (MQ=255)                                aaGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAg                                                                                                                  >  1:312643/1‑150 (MQ=255)                                aaGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGACGCATATCCGCACcgggcaaaaaagtggcgtgga                                                                                                                  >  1:59374‑M2/1‑129 (MQ=255)                                 aGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAgg                                                                                                                 <  2:1183979/150‑1 (MQ=255)                                            cGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCa                                                                                                      >  2:1213058/1‑150 (MQ=255)                                             gACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCAt                                                                                                     >  1:486249/1‑150 (MQ=255)                                              aCCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATg                                                                                                    >  1:358626/1‑150 (MQ=255)                                               ccTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGt                                                                                                   <  1:1177138/150‑1 (MQ=255)                                               ccTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGt                                                                                                   <  2:104684/150‑1 (MQ=255)                                                 tATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCg                                                                                                 >  1:505924/1‑150 (MQ=255)                                                       gctgctGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAaagaa                                                                                           <  1:1213058/150‑1 (MQ=255)                                                       gctgctGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAaagaa                                                                                           <  1:1264523/150‑1 (MQ=255)                                                           ctgATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGa                                                                                                                   <  2:1211087/122‑1 (MQ=255)                                                           ctgATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGa                                                                                                                   >  1:1211087/1‑122 (MQ=255)                                                                aaaCCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTc                                                                                  <  2:505924/150‑1 (MQ=255)                                                                    cAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGaaa                                                                              <  2:486249/150‑1 (MQ=255)                                                                        gcTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGa                                                                          <  2:1238616/150‑1 (MQ=255)                                                                         cTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTGCCGACGCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGAATGTCGAAAGAAGACAGCTTCGAAATGGaa                                                                         <  1:247019/150‑1 (MQ=255)                                                                            ggTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGacgcatatccgcaccggg                                                                                                                                   <  2:539888‑M1/89‑19 (MQ=255)                                                                            ggTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGacgcatatccgcaccggg                                                                                                                                   >  1:539888‑M1/1‑71 (MQ=255)                                                                                  ccTCAACTGAAAGCATTGGCTTCACACGCAGTTTTCCTGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTgtc                                                                <  1:601755/150‑1 (MQ=255)                                                                                   cTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTcgggc                                                                                                                                  >  1:730573‑M2/1‑78 (MQ=255)                                                                                   cTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTcgggc                                                                                                                                  <  2:730573‑M2/83‑6 (MQ=255)                                                                                       aCTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGa                                                           >  1:826571/1‑150 (MQ=255)                                                                                       aCTGAAAGCATTGGCTTGACACGCAGTTGTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGa                                                           >  1:475840/1‑150 (MQ=255)                                                                                          gAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGacac                                                        >  2:260226/1‑150 (MQ=255)                                                                                          gAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGacac                                                        <  2:140379/150‑1 (MQ=255)                                                                                           aaaGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACAcc                                                       >  1:152556/1‑150 (MQ=255)                                                                                            aaGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAggg                                                                                                                <  2:1112123/92‑1 (MQ=255)                                                                                            aaGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAggg                                                                                                                >  1:1112123/1‑92 (MQ=255)                                                                                            aaGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAg                                                                                      <  1:1404223/118‑1 (MQ=255)                                                                                            aaGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAg                                                                                      >  2:1404223/1‑118 (MQ=255)                                                                                                    gCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAac                                              >  2:1261328/1‑150 (MQ=255)                                                                                                        gACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCa                                          >  2:61293/1‑150 (MQ=255)                                                                                                                  tttCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGt                                <  1:260226/150‑1 (MQ=255)                                                                                                                  tttCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGt                                <  1:61293/150‑1 (MQ=255)                                                                                                                       ggCATAATCCACGCCACTTTTTTTCTTTGTTCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACATCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGt                           >  2:602446/1‑150 (MQ=255)                                                                                                                        gCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGtt                          <  2:60951/150‑1 (MQ=255)                                                                                                                              tCCACGCCACTTTTTTGCCCGgtgcggatatgcgtcgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgagggtgacccagcgctggtttatcagcagctcgataggtcggtactgcgtctt                    >  1:59374‑M1/1‑21 (MQ=255)                                                                                                                              tCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGACGACAGCTTCGAAATGGACGGTACTGTCGTCGACACCCTGCCCCACACCATGTTCCGCGTGGCGGTGGaaaa                    >  2:933500/1‑150 (MQ=255)                                                                                                                                cACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTgtcgt                                                              <  2:314995/106‑1 (MQ=255)                                                                                                                                cACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTgtcgt                                                              >  1:314995/1‑106 (MQ=255)                                                                                                                                cACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACg                  >  1:262845/1‑150 (MQ=255)                                                                                                                                cACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACg                  <  1:1261328/150‑1 (MQ=255)                                                                                                                                      aCTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACGGGCAcg            >  1:643140/1‑150 (MQ=255)                                                                                                                                       cTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACGGGCAcgt           >  1:1257759/1‑150 (MQ=255)                                                                                                                                        ttttttGCCCGGTGCGGATATGCGTcgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgagggtgacccagcgctggtttatcagcagctcgataggtcggtactgcgtcttgtagttcatc          <  1:1218798‑M2/150‑126 (MQ=255)                                                                                                                                              gCCCGacgcatatccgcaccgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgag                                                                       >  1:730573‑M1/1‑5 (MQ=255)                                                                                                                                              gCCCGacgcatatccgcaccgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgag                                                                       <  2:730573‑M1/83‑79 (MQ=255)                                                                                                                                               cccGGTGCGGATATGCGTcgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgagggtgacccagcgctggtttatcagcagctcgataggtcggtactgcgtcttgtagttcatcttcttgc   >  2:59374‑M2/1‑18 (MQ=255)                                                                                                                                               cccGGTGCGGATATGCGTcgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgagggtgacc                                                                <  2:539888‑M2/89‑72 (MQ=255)                                                                                                                                               cccGGTGCGGATATGCGTcgggcaaaaaagtggcgtggattatgccggaaaactgcgtgtcaagccaatgctttcagttgagggtgacc                                                                >  1:539888‑M2/1‑18 (MQ=255)                                                                                                                                                ccGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCACGTGCCGCGTGGAGTTGGAAAACGGGCACGTCGTAACcgc  <  2:152556/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CTGGATCAAGAACTGCAAGAAGATGAACTACAAGACGCAGTACCGACCTATCGAGCTGCTGATAAACCAGCGCTGGGTCACCCTCAACTGAAAGCATTGGCTTGACACGCAGTTTTCCGGCATAATCCACGCCACTTTTTTGCCCGGTGCGGATATGCGTCGGGCTAACATTGGATCCGAGGGCTCAACTGCATGTCGAAAGAAGACAGCTTCGAAATGGAAGGTACTGTCGTCGACACCCTGCCCAACACCATGTTCCGCGTGGAGTTGGAAAACGGGCACGTCGTAACCGC  >  NC_002947/4516797‑4517089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.