New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4643020	50 (0.950)	9 (0.180)	6/228	NT	16.2%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4643043	47 (0.970)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase

CTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACAAGG  >  NC_002947/4642877‑4643167                                                                                                                                                 |                                                                                                                                                    cTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAgg                                                                                                                                               >  2:76485/1‑150 (MQ=255) cTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCA‑CACGTCTGATGTAGTGGATCCGGGAGCGGGTGGCCGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAgg                                                                                                                                               >  1:1315110/1‑150 (MQ=255)      accaccCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCgg                                                                                                                                          >  1:92049/1‑150 (MQ=255)          cccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCtt                                                                                                                                      <  1:1058912/150‑1 (MQ=255)           ccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgc                                                                                                                                     >  1:822660‑M1/1‑134 (MQ=255)           ccTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTg                                                                                                                                     >  2:1320585/1‑150 (MQ=255)             tgtgGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTTATTTGACCTCCCCCGGCCTCTGGCAGGAGCGGGCTTGcc                                                                                                                                   <  1:542426/150‑1 (MQ=255)                     gCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAaga                                                                                                                           >  1:1356987‑M2/1‑147 (MQ=255)                      cAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagag                                                                                                                          <  1:1407123‑M2/150‑5 (MQ=255)                       aaCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGGGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagagg                                                                                                                         <  1:55993‑M2/150‑6 (MQ=255)                        aCGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggc                                                                                                                        >  2:609659‑M2/1‑144 (MQ=255)                         ggggaGGCACTTCAGCGCACATGCCGAGAATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggcc                                                                                                                       <  2:292003‑M1/149‑31 (MQ=255)                          gggAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccg                                                                                                                      >  1:76485‑M2/1‑142 (MQ=255)                           ggAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                     <  2:822660‑M1/150‑33 (MQ=255)                           ggAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                     <  1:42988‑M1/150‑33 (MQ=255)                             aGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGTTCCCTTTCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgggg                                                                                                                   <  1:87707‑M1/150‑35 (MQ=255)                                  cTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGcc                                                                                                              >  2:577451/1‑150 (MQ=255)                                   ttCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCa                                                                                                             >  1:54808/1‑150 (MQ=255)                                      aTCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAAcc                                                                                                          <  1:1320585/150‑1 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGTGATTGATTTGACCTGCCCCGTCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAAccc                                                                                                         >  1:1378646/1‑150 (MQ=255)                                       tCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAAccc                                                                                                         >  2:246700/1‑150 (MQ=255)                                        cgcgCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCa                                                                                                        <  1:127174/150‑1 (MQ=255)                                              tGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAAc                                                                                                  <  2:1197698/150‑1 (MQ=255)                                               gCCGAGCATGCGGGCGCCGTGCACAAGATCGGGGACT‑TTGTGCAGTTGATCCGGGAGTGGGTGGCTGAAGGCGATTGATTTAACCTGTCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAAcc                                                                                                 <  2:434612/150‑1 (MQ=255)                                               gCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAAcc                                                                                                 <  1:246700/150‑1 (MQ=255)                                                ccGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggc                                                                                                                        <  2:502221‑M2/126‑7 (MQ=255)                                                ccGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggc                                                                                                                        >  1:502221‑M2/1‑120 (MQ=255)                                                 cGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGccc                                                                                                                                  >  2:1298843/1‑115 (MQ=255)                                                 cGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGccc                                                                                                                                  <  1:1298843/115‑1 (MQ=255)                                                  gAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCAATGGGTTACAGGAGCGGGCTTGATCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGc                                                                                              >  1:728084/1‑150 (MQ=255)                                                           gCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACg                                                                                     >  2:142327/1‑150 (MQ=255)                                                                  tGCCCAAGATCAGGGCGT‑TCGTGCAGTGGATCCGGGAGGAGATCGCTGAAGGTGATTTATTTGGCTTGCCCCGTCCTCTGGCAGGAGCGGGATCGCCACAGACCCGCCAGGAACCGCCACCCCACCCAACCGGCTAGATCACTAATCCAt                                                                              <  2:1378646/150‑1 (MQ=255)                                                                    cccAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATgg                                                                            <  1:125174/150‑1 (MQ=255)                                                                      caggATCAGGGCCT‑TCGTGCAGTGGATCTGGGAGCGGGTGGCTGAAGGCGATTGATTTGCCCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCGCAGCGAACCCAAAAAACCGGCTAGATCACGAATCCATGGaa                                                                          >  2:318667/4‑150 (MQ=255)                                                                      cAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGaa                                                                          >  1:1124909/1‑150 (MQ=255)                                                                      cAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAACGTTAATGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGACAACCCAAAAAACCGGCTAGATCACGAATCCATGGaa                                                                          <  1:1155871/150‑1 (MQ=255)                                                                       aaGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAAt                                                                         <  1:694267/150‑1 (MQ=255)                                                                            cAGGGCCT‑TCGGGCACTGGCTCCGGAGGCGGGTGGCTGAAGCCTCTTGACTTGACCGGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAACCAACCGCCTAGATCACGACTCCATGGAATTATCg                                                                    <  2:448445/150‑1 (MQ=255)                                                                             aGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGc                                                                   >  2:628735/1‑150 (MQ=255)                                                                              gggCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGAGTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCa                                                                  >  2:522037/1‑150 (MQ=255)                                                                               ggCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTgg                                                                                                                                                   <  2:908037/68‑1 (MQ=255)                                                                               ggCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTgg                                                                                                                                                   >  1:908037/1‑68 (MQ=255)                                                                                        tGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGaataa                                                         >  2:1392402/1‑150 (MQ=255)                                                                                              ggATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                     >  1:686285‑M1/1‑52 (MQ=255)                                                                                              ggATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgg                                                                                                                     <  2:686285‑M1/84‑33 (MQ=255)                                                                                                  ccGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCg                                               <  1:1392402/150‑1 (MQ=255)                                                                                                     ggAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGaa                                            <  1:142327/150‑1 (MQ=255)                                                                                                         cGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAAc                                        <  1:272135/150‑1 (MQ=255)                                                                                                                 tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAg                                                                                                                <  1:11032/70‑1 (MQ=255)                                                                                                                 tGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAg                                                                                                                >  2:11032/1‑70 (MQ=255)                                                                                                                   aaGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGacac                              >  1:842783/1‑150 (MQ=255)                                                                                                                        tattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGACAGACACGGGTCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATAGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTg                         >  1:615923/2‑150 (MQ=255)                                                                                                                        gattgattTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgggg                                                                                                                   <  2:1321050‑M1/60‑35 (MQ=255)                                                                                                                        gattgattTGACCTGCCCCGGCCTCTtcgcgggcaagcccgctcctgccagaggccgggg                                                                                                                   >  1:1321050‑M1/1‑26 (MQ=255)                                                                                                                        gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTg                         >  2:1113402/1‑150 (MQ=255)                                                                                                                        gattgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTg                         >  2:994592/1‑150 (MQ=255)                                                                                                                          ttgattTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGa                       <  2:92049/150‑1 (MQ=255)                                                                                                                             attTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGataa                    <  2:1315110/150‑1 (MQ=255)                                                                                                                              tttGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCg                                                                    <  2:140703/101‑1 (MQ=255)                                                                                                                              tttGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCg                                                                    >  1:140703/1‑101 (MQ=255)                                                                                                                              tttGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGataat                   >  1:853353/1‑150 (MQ=255)                                                                                                                                  aCCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGa               <  2:54808/150‑1 (MQ=255)                                                                                                                                    cTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGaaa             >  1:462331/1‑150 (MQ=255)                                                                                                                                       ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaagaaagggaacttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcct          <  1:87707‑M2/150‑117 (MQ=255)                                                                                                                                       ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatc                                                                                                    >  1:1321050‑M2/1‑34 (MQ=255)                                                                                                                                       ccccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatc                                                                                                    <  2:1321050‑M2/60‑27 (MQ=255)                                                                                                                                        cccGGCCTCTGGCAGGACCGGCGTTGCACGCGAAGAGGCCGGCACACCAAATCCAAAAAACCGGCTAGATCACGAATCCATAGAATGATCGCAATCGAATAATTCGTTTGCCGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCg         <  1:577451/150‑1 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcc        <  2:822660‑M2/150‑119 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcc        <  1:42988‑M2/150‑119 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatcc                                                                          <  2:686285‑M2/84‑53 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatcc                                                                          >  1:686285‑M2/1‑32 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGc                                                                                              <  1:672883/64‑1 (MQ=255)                                                                                                                                         ccGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGc                                                                                              >  2:672883/1‑64 (MQ=255)                                                                                                                                          cGGCCTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctccc       >  1:76485‑M1/1‑8 (MQ=255)                                                                                                                                          cGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGaa       >  2:740109/1‑150 (MQ=255)                                                                                                                                          cGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGaa       >  1:278837/1‑150 (MQ=255)                                                                                                                                           ggCCTCTGGCAGGAGCGGGCTTGCCCGCGAagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcattctcggcatgtgcgctgaagtgcctcccc      <  2:292003‑M2/150‑121 (MQ=255)                                                                                                                                            gCCTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgt     >  2:609659‑M1/1‑6 (MQ=255)                                                                                                                                            gCCTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcgg                             >  1:502221‑M1/1‑6 (MQ=255)                                                                                                                                            gCCTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcgg                             <  2:502221‑M1/126‑121 (MQ=255)                                                                                                                                             ccTCTtcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgcccccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgtt    <  1:55993‑M1/150‑146 (MQ=255)                                                                                                                                             ccTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACaa    <  1:628735/150‑1 (MQ=255)                                                                                                                                              ctcttcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgttg   <  1:1407123‑M1/150‑147 (MQ=255)                                                                                                                                              ctctGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTa                                                                                            >  2:699649/1‑61 (MQ=255)                                                                                                                                              ctctGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTa                                                                                            <  1:699649/61‑1 (MQ=255)                                                                                                                                              ctctGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACAAg   >  2:286938/1‑150 (MQ=255)                                                                                                                                               tcttcgcgggcaagcccgctcctgccagaggccggggcaggtcaaatcaatcgccttcagccacccgctcccggatccactgcacgaaggccctgatcttgggcacttcggccgcatgctcggcatgcgcgatgaagtgcctcccgttgc  >  1:1356987‑M1/1‑3 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCT‑TCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTGGCAGGAGCGGGCTTGCCCGCGAAGAGGCCGGCACAGCCAACCCAAAAAACCGGCTAGATCACGAATCCATGGAATGATCGCAATCGAATAATTCGTTTGCGGAATAACCCGCCGACACGCTTGGATAATAAGAAACTCGAACAAGG  >  NC_002947/4642877‑4643167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.