New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 587706358 (1.100)3 (0.070) 3/198 NT 4.9% intergenic (+29/+76) rpiA/PP_5151 ribose‑5‑phosphate isomerase A/hypothetical protein
?NC_002947 = 5877097 69 (1.630)intergenic (+63/+42) rpiA/PP_5151 ribose‑5‑phosphate isomerase A/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

TGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT  >  NC_002947/5876916‑5877209
                                                                                                                                                   |                                                                                                                                                   
tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                                                   <  2:1074485/150‑1 (MQ=255)
tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                                                   <  1:1149136/150‑1 (MQ=255)
tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTGCGCGGGTAAACCCGCTCCTACAAg                                                                                                                                                   <  1:1261789/150‑1 (MQ=255)
  gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGt                                                                                                                                                 >  1:975508/1‑150 (MQ=255)
        cAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCa                                                                                                                                          >  1:647707/1‑150 (MQ=255)
            tCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCg                                                                                                                                       <  1:1091771/149‑1 (MQ=255)
            tCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCg                                                                                                                                       >  2:1091771/1‑149 (MQ=255)
               aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCt                                                                                                                                   <  2:647707/150‑1 (MQ=255)
                       gtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTCAAGGTTTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGt                                                                                                                           <  1:1157752/150‑1 (MQ=255)
                        tcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTg                                                                                                                          <  2:957325/150‑1 (MQ=255)
                        atggCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTg                                                                                                                          <  2:440727/148‑1 (MQ=255)
                                     cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtag                                                                                                              <  2:692564‑M1/150‑40 (MQ=255)
                                     cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtag                                                                                                              >  1:234042‑M1/1‑111 (MQ=255)
                                     cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtag                                                                                                             <  1:1305503‑M2/150‑6 (MQ=255)
                                     cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtag                                                                                                             >  2:1189823‑M2/1‑145 (MQ=255)
                                       aCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtagga                                                                                                            <  2:234042‑M1/150‑42 (MQ=255)
                                          gCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcg                                                                                                        >  2:675554‑M2/1‑140 (MQ=255)
                                           ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgg                                                                                                       <  2:891321‑M2/150‑12 (MQ=255)
                                            cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAGCCCTTCGCGGGTCCACCAGATCCTGGCCG‑TACAACCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcggg                                                                                                      <  1:1028029‑M2/150‑13 (MQ=255)
                                               ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggttt                                                                                                   <  2:1079745‑M2/150‑16 (MQ=255)
                                               ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggttt                                                                                                   >  1:1079745‑M2/1‑135 (MQ=255)
                                               ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggttt                                                                                                   <  1:777739‑M2/150‑16 (MQ=255)
                                               ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcggg                                                                                                      >  2:360245‑M2/1‑135 (MQ=255)
                                               ttCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcggg                                                                                                      <  1:360245‑M2/147‑13 (MQ=255)
                                                  gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCAATTCCtgtaggagcgtgtttacc                                                                                                >  2:667759‑M2/1‑132 (MQ=255)
                                                   cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttaccc                                                                                               >  1:1323560‑M2/1‑131 (MQ=255)
                                                     gcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc                                                                                             >  2:777739‑M2/1‑129 (MQ=255)
                                                          gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCAGCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa                                                                                        <  1:748552/150‑1 (MQ=255)
                                                              gcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGcc                                                                                    >  2:27128/1‑150 (MQ=255)
                                                               cggGTCTGCTGCTGCTGGGCCCCGCTGCAGGCGTGAAGAGCATGAAGTCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGccc                                                                                   <  2:282929/150‑1 (MQ=39)
                                                               cggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGccc                                                                                   <  1:1347512/150‑1 (MQ=255)
                                                               cggATCCGCTGCTGCTGGGCACCCCTGAAGGCGTTAAGATCCTGAAGGCCGAGTAAAACCCTTCATCGGGAAGCCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGccc                                                                                   <  1:247255/150‑1 (MQ=255)
                                                                 gATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTg                                                                                 >  1:848999/1‑150 (MQ=255)
                                                                 gATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTg                                                                                 >  1:1209122/1‑150 (MQ=255)
                                                                 gATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTg                                                                                 >  1:778234/1‑150 (MQ=255)
                                                                   tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAc                                                                               >  1:412845/1‑150 (MQ=255)
                                                                     tgctgctgctgGGCACCGCTGAAGGCGTGAAGATCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACATGGTACC‑CCACACGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAg                                                                             <  1:254717/150‑1 (MQ=255)
                                                                     tgctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAg                                                                             <  1:150651/150‑1 (MQ=255)
                                                                        tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCg                                                                          >  1:466492/1‑150 (MQ=255)
                                                                         gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGa                                                                         <  1:24739/150‑1 (MQ=255)
                                                                          ctgctgGGCACCGCTGAAGGCGTGGAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAt                                                                        >  1:1413962/1‑150 (MQ=255)
                                                                            gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                      <  2:1081671/150‑1 (MQ=255)
                                                                             ctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATcc                                                                                                                   <  1:762489/104‑1 (MQ=255)
                                                                             ctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATcc                                                                                                                   >  2:762489/1‑104 (MQ=255)
                                                                              tgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt                                                                    <  1:991504/150‑1 (MQ=255)
                                                                                  cACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggt                                                                                                     >  1:1355341‑M2/1‑100 (MQ=255)
                                                                                  cACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggt                                                                                                     <  2:1355341‑M2/113‑14 (MQ=255)
                                                                                  cACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATcagtccgt                                                                <  1:1421155/150‑1 (MQ=255)
                                                                                   aCCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCTCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc                                                               <  1:955555/150‑1 (MQ=255)
                                                                                   aCCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc                                                               <  1:935141/150‑1 (MQ=255)
                                                                                   aCCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc                                                               >  1:574193/1‑150 (MQ=255)
                                                                                   aCCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATAagtcagtc                                                               >  1:61809/1‑150 (MQ=255)
                                                                                     cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCgg                                                             >  2:294322/1‑150 (MQ=255)
                                                                                      gCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgc                                                            <  1:294322/150‑1 (MQ=255)
                                                                                        tGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctg                                                          <  2:900125/150‑1 (MQ=255)
                                                                                              cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa                                                    <  1:1321417/150‑1 (MQ=255)
                                                                                                  aaGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca                                                <  2:848999/150‑1 (MQ=255)
                                                                                                  aaGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca                                                >  1:301856/1‑150 (MQ=255)
                                                                                                    gagCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATcc                                                                                                                   <  2:945644/81‑1 (MQ=255)
                                                                                                    gagCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATcc                                                                                                                   >  1:945644/1‑81 (MQ=255)
                                                                                                        cTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc                                          >  2:547587/1‑150 (MQ=255)
                                                                                                         tGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa                                         >  1:801415/1‑150 (MQ=255)
                                                                                                          gAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg                                        <  2:301856/150‑1 (MQ=255)
                                                                                                             ggCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGtt                                     <  2:466492/150‑1 (MQ=255)
                                                                                                              gCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATa                                              >  1:1157989/1‑140 (MQ=255)
                                                                                                                cGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg                                  >  1:1067584/1‑150 (MQ=255)
                                                                                                                 gAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc                                 <  2:1209122/150‑1 (MQ=255)
                                                                                                                       aaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTg                           >  1:1357067/1‑150 (MQ=255)
                                                                                                                       aaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTg                           >  2:365490/1‑150 (MQ=255)
                                                                                                                       aaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTg                           >  1:1396214/1‑150 (MQ=255)
                                                                                                                          ccTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGAcc                        >  1:901725/1‑150 (MQ=255)
                                                                                                                               gcgGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgc                    >  2:777739‑M1/1‑21 (MQ=255)
                                                                                                                                 gggTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccg                  >  1:1323560‑M1/1‑19 (MQ=255)
                                                                                                                                  ggTAAACACGCTCCTACAggaattgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgc                 >  2:667759‑M1/1‑18 (MQ=255)
                                                                                                                                     aaaCCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaa              <  1:777739‑M1/150‑136 (MQ=255)
                                                                                                                                     aaaCCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaa              <  2:1079745‑M1/150‑136 (MQ=255)
                                                                                                                                     aaaCCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaa              >  1:1079745‑M1/1‑15 (MQ=255)
                                                                                                                                     aaaCCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGt             <  1:547587/150‑1 (MQ=255)
                                                                                                                                      aaCCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTc            <  2:1396214/150‑1 (MQ=255)
                                                                                                                                      aaCCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTc            <  2:1357067/150‑1 (MQ=255)
                                                                                                                                       aCCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtg                                                 <  2:1355341‑M1/113‑101 (MQ=255)
                                                                                                                                       aCCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtg                                                 >  1:1355341‑M1/1‑13 (MQ=255)
                                                                                                                                       aCCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcc           <  2:1305503/150‑1 (MQ=255)
                                                                                                                                        cccGCTCCTACAgggatcgccacggttccaggccggtggttgtacggccaggatctggtggacccgcgaagggctttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacag           <  1:1028029‑M1/150‑139 (MQ=255)
                                                                                                                                        cccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaa              >  2:360245‑M1/1‑12 (MQ=255)
                                                                                                                                        cccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaa              <  1:360245‑M1/147‑136 (MQ=255)
                                                                                                                                         ccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg          <  2:891321‑M1/150‑140 (MQ=255)
                                                                                                                                         ccGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcccc         <  1:891321/150‑1 (MQ=255)
                                                                                                                                          cGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggc         >  2:675554‑M1/1‑10 (MQ=255)
                                                                                                                                           gCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGc       >  1:931108/1‑150 (MQ=255)
                                                                                                                                             tCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt     <  2:234042‑M2/150‑110 (MQ=255)
                                                                                                                                               cTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg    >  2:1189823‑M1/1‑5 (MQ=255)
                                                                                                                                               cTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg    <  1:1305503‑M1/150‑146 (MQ=255)
                                                                                                                                               cTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg   <  2:692564‑M2/150‑112 (MQ=255)
                                                                                                                                               cTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg   >  1:234042‑M2/1‑39 (MQ=255)
                                                                                                                                                tACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcat  >  2:901382/1‑150 (MQ=255)
                                                                                                                                                tACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcat  <  2:901725/150‑1 (MQ=255)
                                                                                                                                                  cAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc                                                               <  2:241059/87‑1 (MQ=255)
                                                                                                                                                  cAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCagtcagtc                                                               >  1:241059/1‑87 (MQ=255)
                                                                                                                                                   aaGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa                       <  2:649518/126‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACC‑CCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT  >  NC_002947/5876916‑5877209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.