New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6098913	50 (0.950)	3 (0.060)	3/228	NT	6.3%	coding (232/867 nt)	PP_5350	RpiR family transcriptional regulator
	?	NC_002947	= 6098932	43 (0.880)					coding (213/867 nt)	PP_5350	RpiR family transcriptional regulator

CCATGGCGCTCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGG  >  NC_002947/6098769‑6099061                                                                                                                                                 |                                                                                                                                                      ccATGGCGCTCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCCAACTGACCGAAGATGGCACCgg                                                                                                                                                  <  2:766167/150‑1 (MQ=255)   aTGGCGCTCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCa                                                                                                                                                <  1:988098/150‑1 (MQ=255)         cTCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAgg                                                                                                                                          >  2:383778/1‑150 (MQ=255)          tCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGc                                                                                                                                         <  1:888402/150‑1 (MQ=255)             cGGCTTGTTGCAGCGCCTTCGGATCAAGGGGCTCGCGCACTTCCATCAGGGTGTGCAGGGGGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCCAACTGACCGAAGCTGGCCCCGGCAGCGATGCttt                                                                                                                                      >  2:218876/1‑150 (MQ=255)                      gCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGAAGGGGGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgccagct                                                                                                                             <  1:329819‑M2/150‑8 (MQ=255)                          cgcCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCgcaaagcctggctgccggggccagcttcgg                                                                                                                         <  1:534124‑M1/150‑31 (MQ=255)                           gcCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgccag                                                                                                                               <  2:276916‑M2/143‑6 (MQ=255)                           gcCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgccag                                                                                                                               >  1:276916‑M2/1‑138 (MQ=255)                               gCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAgcttcagcttca                                                                                                                    <  1:383778/150‑1 (MQ=255)                                 ggATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAgg                                                                                                                  <  2:783324/150‑1 (MQ=255)                                  gATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAg                                                                                                                                           >  2:459224/1‑124 (MQ=255)                                  gATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAg                                                                                                                                           <  1:459224/124‑1 (MQ=255)                                        ggTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTgg                                                                                                            <  2:1335274/149‑1 (MQ=255)                                        ggTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTgg                                                                                                            >  1:1335274/1‑149 (MQ=255)                                         gTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGaa                                                                                                          <  1:146855/150‑1 (MQ=255)                                               gcgcACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGa                                                                                                    <  2:437908/150‑1 (MQ=255)                                                         agcAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGCACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATg                                                                                         >  1:634033/3‑150 (MQ=255)                                                         aTCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCagcttcagcttc                                                                                                                     >  1:1245902/1‑123 (MQ=255)                                                         aTCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCagcttcagcttc                                                                                                                     <  2:1245902/123‑1 (MQ=255)                                                          tCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgc                                                                                                                                  >  1:896426‑M2/1‑107 (MQ=255)                                                          tCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgc                                                                                                                                  <  2:896426‑M2/109‑3 (MQ=255)                                                          tCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATgg                                                                                        <  1:803946/150‑1 (MQ=255)                                                             gggTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCgcaaagcctggctgccggggccagcttc                                                                                                                           <  1:1423845‑M1/113‑29 (MQ=255)                                                             gggTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCgcaaagcctggctgccggggccagcttc                                                                                                                           >  2:1423845‑M1/1‑85 (MQ=255)                                                             gggTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGccc                                                                                     <  1:569856/150‑1 (MQ=255)                                                              ggTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCg                                                                                    <  1:989002/150‑1 (MQ=255)                                                                 gtgCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAgg                                                                                                                                          >  2:350027/1‑94 (MQ=255)                                                                 gtgCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAgg                                                                                                                                          <  1:350027/94‑1 (MQ=255)                                                                   gCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTACGTCATCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGa                                                                               >  1:1021823/1‑150 (MQ=255)                                                                    cAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGa                                                                                                    <  2:206297/129‑1 (MQ=255)                                                                    cAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGa                                                                                                    >  1:206297/1‑129 (MQ=255)                                                                           gtgtCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACg                                                                       >  2:883036/1‑150 (MQ=255)                                                                              tCGAAGAACTTCAGGCTGTAGTCGGCGCCCGAATCGTATTCGTGAATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGCAACCCGAGCA‑GCAAATGGCCCGACAGAAACGCCCGATg                                                                    >  2:648865/1‑150 (MQ=255)                                                                                gAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGt                                                                  >  2:966737/1‑150 (MQ=255)                                                                                 aaGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAACTTCGCGTTGCAGAAGCCCGAGTG‑GCCAATGGCCCGGCAGAAACGCACGATGGTc                                                                 <  1:218876/150‑1 (MQ=255)                                                                                   gATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATgg                                                                                        >  2:257333/1‑125 (MQ=255)                                                                                   gATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATgg                                                                                        <  1:257333/125‑1 (MQ=255)                                                                                    aTCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGc                                                              >  1:920045/1‑150 (MQ=255)                                                                                       ttCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCcagcttca                                                                                                                          >  2:649361/1‑88 (MQ=255)                                                                                       ttCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCcagcttca                                                                                                                          <  1:649361/88‑1 (MQ=255)                                                                                       ttCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCa                                                           >  1:414901/1‑150 (MQ=255)                                                                                         cAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACt                                                         <  1:817341/150‑1 (MQ=255)                                                                                           ggCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGa                                                       >  2:835333/1‑150 (MQ=255)                                                                                            gCTGTAGTCGGTGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCTGGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGGCGGCTCACTGAt                                                      >  1:865611/1‑150 (MQ=255)                                                                                            gCTGTAGTCGGCGACCGAATCGTCTTGGTGGATGGCGACCTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTCCGCCAGCTTCAGCTTCAGGCCCTGGAAGCCCGAGCA‑GCAAACGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGAt                                                      >  1:475281/1‑150 (MQ=255)                                                                                            gCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCa                                                                         <  2:1178174/131‑1 (MQ=255)                                                                                            gCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCa                                                                         >  1:1178174/1‑131 (MQ=255)                                                                                            gCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGAt                                                      >  2:981317/1‑150 (MQ=255)                                                                                              tGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCACAGCGAT‑GCCCGGCAGAAACGCACGATGGTCGGCTCACTGATAc                                                    >  1:727336/1‑150 (MQ=255)                                                                                                tAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATAccc                                                  >  2:1388463/1‑150 (MQ=255)                                                                                                 aGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCa                                                 <  2:926642/150‑1 (MQ=255)                                                                                                             aaTCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgcc                                                                                                                                 <  1:460201‑M2/59‑4 (MQ=255)                                                                                                             aaTCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCgcc                                                                                                                                 >  2:460201‑M2/1‑56 (MQ=255)                                                                                                                        tGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATg                          <  2:861279/150‑1 (MQ=255)                                                                                                                             ggCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCt                     <  1:981317/150‑1 (MQ=255)                                                                                                                                gAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCtgtg                  >  2:595012/1‑150 (MQ=255)                                                                                                                                  aCTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCa                >  1:663502/1‑150 (MQ=255)                                                                                                                                       ccGAAGCTGGCCCCGGCAGCCAGGCTTTGCgccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaggcg            <  1:534124‑M2/150‑121 (MQ=255)                                                                                                                                        cGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTgc                                         >  1:469496/1‑119 (MQ=255)                                                                                                                                        cGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTgc                                         <  2:469496/119‑1 (MQ=255)                                                                                                                                         gAAGCTGGCCCCGGCAGCCAGGCTTTGCgccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccc                                               <  1:1423845‑M2/113‑86 (MQ=255)                                                                                                                                         gAAGCTGGCCCCGGCAGCCAGGCTTTGCgccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccc                                               >  2:1423845‑M2/1‑28 (MQ=255)                                                                                                                                          aaGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCa        <  2:663502/150‑1 (MQ=255)                                                                                                                                           aGCTGGCgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccccccttcacaccctgatggaagtgcgcgagcaccttgatccgcaggcgctgc        <  1:329819‑M1/150‑144 (MQ=255)                                                                                                                                             cTGGCgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaggc             >  1:276916‑M1/1‑5 (MQ=255)                                                                                                                                             cTGGCgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaggc             <  2:276916‑M1/143‑139 (MQ=255)                                                                                                                                               ggCgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgatt                                                                                               >  2:460201‑M1/1‑3 (MQ=255)                                                                                                                                               ggCgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgatt                                                                                               <  1:460201‑M1/59‑57 (MQ=255)                                                                                                                                                gcgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccctga                                            >  1:896426‑M1/1‑2 (MQ=255)                                                                                                                                                gcgcaaagcctggctgccggggccagcttcggtcagttcgccatccacgaagacgattcggtcgccgactacagcctgaagatcttcgacaccaccctgcacaccctga                                            <  2:896426‑M1/109‑108 (MQ=255)                                                                                                                                                gCCCCGGCAGCCAGGCTTTACGTTAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCggg  <  2:329819/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CCATGGCGCTCACGGCTTGTTGCAGCGCCTGCGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCA‑GCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGG  >  NC_002947/6098769‑6099061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.