New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 10955776 (1.450)4 (0.080) 4/246 NT 5.2% coding (748/1128 nt) PP_0103 cytochrome c oxidase subunit 2
?NC_002947 = 109591 70 (1.330)coding (782/1128 nt) PP_0103 cytochrome c oxidase subunit 2

CCCGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTCCCGGCGCTCAAAGGCTCGAAGATTGC  >  NC_002947/109444‑109738
                                                                                                                                                    |                                                                                                                                                   
cccGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCa                                                                                                                                                   <  2:1362432/150‑1 (MQ=255)
cccGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCa                                                                                                                                                   >  1:365015/1‑150 (MQ=255)
 ccGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGGTCGCAAGGCTGAAGCCGCCAAGCTCaa                                                                                                                                                  >  1:919/1‑150 (MQ=255)
 ccGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCaa                                                                                                                                                  >  1:149870/1‑150 (MQ=255)
  cGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAg                                                                                                                                                 <  1:502895/150‑1 (MQ=255)
   ggATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGAGTACGACAGCTGGCTTGGCGAGGGCAAGGCTGAAGCCGCCAAGCTCAAgg                                                                                                                                                >  2:288906/1‑150 (MQ=255)
    gATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGa                                                                                                                                               <  2:1196422/150‑1 (MQ=255)
     aTCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCTCCAAGCTCAATGAg                                                                                                                                              <  2:313357/150‑1 (MQ=255)
      tCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTTGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGc                                                                                                                                             <  2:192769/150‑1 (MQ=255)
         aaaaGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGa                                                                                                                                          <  1:1172920/150‑1 (MQ=255)
         aaaaGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGa                                                                                                                                          >  1:121531/1‑150 (MQ=255)
         aaaaGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCCGCCGTTGCAACGGCTTCATGCGGAGGGCGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCAAGCGCAAGGCTGAAGACGCCAAGCTCAAGGAGCTGa                                                                                                                                          >  2:49450/1‑150 (MQ=255)
          aaaGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGAc                                                                                                                                         <  1:1089820/150‑1 (MQ=255)
             gCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAg                                                                                                                                      >  2:893919/1‑150 (MQ=255)
                aGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTAGCTTGGCGGCTTCAGCCTTGCGCTCGCCAAGCCaggtgtcgtaatccgcct                                                                                                                                   >  2:247489‑M2/1‑132 (MQ=255)
                          cgcgGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGAcc                                                                                                                         <  1:275717/150‑1 (MQ=255)
                           gcgGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGAccc                                                                                                                        >  2:719736/1‑150 (MQ=255)
                              gCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTgg                                                                                                                     <  2:564845/150‑1 (MQ=255)
                                cAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGaa                                                                                                                   <  1:619784/150‑1 (MQ=255)
                                     cACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCt                                                                                                              >  2:475568/1‑150 (MQ=255)
                                        cGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCa                                                                                                                                                   >  2:813171/1‑110 (MQ=255)
                                        cGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCa                                                                                                                                                   <  1:813171/110‑1 (MQ=255)
                                                 cGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCgcgg                                                                                                  <  1:893919/150‑1 (MQ=255)
                                                    cAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGa                                                                                               <  2:1211294/150‑1 (MQ=255)
                                                       ggACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACaa                                                                                            <  2:22331/150‑1 (MQ=255)
                                                        gACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAg                                                                                           <  1:719736/150‑1 (MQ=255)
                                                           cACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTc                                                                                        >  2:407506/1‑150 (MQ=255)
                                                           cACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTc                                                                                        <  2:433631/150‑1 (MQ=255)
                                                           cACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTc                                                                                        >  2:963987/1‑150 (MQ=255)
                                                              ggCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTac                                                                                     <  1:868979/150‑1 (MQ=255)
                                                              ggCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGAAACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTTGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTac                                                                                     <  2:1244687/150‑1 (MQ=255)
                                                               gCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTacc                                                                                    >  2:1355537/1‑150 (MQ=255)
                                                                cTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTacca                                                                                   >  2:563656/1‑150 (MQ=255)
                                                                 ttCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAg                                                                                                                                  >  2:753840/1‑102 (MQ=255)
                                                                 ttCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAg                                                                                                                                  <  1:753840/102‑1 (MQ=255)
                                                                 ttCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTaccac                                                                                  <  2:190987/150‑1 (MQ=255)
                                                                      gCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTaccacaccac                                                                             <  2:149870/150‑1 (MQ=255)
                                                                             gtggtCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTg                                                                      <  1:1306688/150‑1 (MQ=255)
                                                                                 tCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGt                                                                                         >  1:423947/1‑127 (MQ=255)
                                                                                 tCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGt                                                                                         <  2:423947/127‑1 (MQ=255)
                                                                                 tCGAGGACAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCt                                                                  <  1:771347/150‑1 (MQ=255)
                                                                                       tCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTg                                                                                                                      <  2:1397135/92‑1 (MQ=255)
                                                                                       tCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTg                                                                                                                      >  1:1397135/1‑92 (MQ=255)
                                                                                       tCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCAcc                                                            >  2:1030332/1‑150 (MQ=255)
                                                                                        cAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCa                                                           <  2:454892/150‑1 (MQ=255)
                                                                                           gTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTaccacac                                                                                >  2:1069214/1‑126 (MQ=255)
                                                                                           gTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTaccacac                                                                                <  1:1069214/126‑1 (MQ=255)
                                                                                           gTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGc                                                        >  2:1426051/1‑150 (MQ=255)
                                                                                               aaGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACCCCACCTGCGTGGCCTGTCACCAGGCCGaa                                                    <  1:970831/150‑1 (MQ=255)
                                                                                               aaGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGaa                                                    <  1:407506/150‑1 (MQ=255)
                                                                                                aGGCGGATTACGACACCTGGCTTGGCGAGCGCGAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGc                                                                         >  1:1342243/1‑128 (MQ=255)
                                                                                                aGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGc                                                                         <  2:1342243/128‑1 (MQ=255)
                                                                                                       ttACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAagg                                            >  2:204055/1‑150 (MQ=255)
                                                                                                        tACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGc                                           <  2:121531/150‑1 (MQ=255)
                                                                                                           gACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTacc                                                                                    >  1:77541/1‑106 (MQ=255)
                                                                                                           gACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTacc                                                                                    <  2:77541/106‑1 (MQ=255)
                                                                                                              acCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTgccg                                     >  2:647788/1‑150 (MQ=255)
                                                                                                              acCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTgccg                                     >  1:156011/1‑150 (MQ=255)
                                                                                                                cTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTaggtgtcgtaatccgccttggacttgacctcgaccaccaccggcatgaagccgtggtccttgccgcacagctcggt                                                                         >  1:357447‑M2/1‑36 (MQ=255)
                                                                                                                cTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTaggtgtcgtaatccgccttggacttgacctcgaccaccaccggcatgaagccgtggtccttgccgcacagctcggt                                                                         <  2:357447‑M2/112‑77 (MQ=255)
                                                                                                                cTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTgccgc                                    >  2:587988/1‑149 (MQ=255)
                                                                                                                cTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTgccgc                                    <  1:587988/149‑1 (MQ=255)
                                                                                                                  ggCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCaa                                 <  1:1030332/150‑1 (MQ=255)
                                                                                                                   gCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAAt                                >  1:44052/1‑150 (MQ=255)
                                                                                                                    cTTGGCGAGCGCAAGGCTGCAGCGGCCAGCCTGTACCAGCTGACCAGCAAGTAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATg                               <  2:156011/150‑1 (MQ=255)
                                                                                                                    cTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATg                               <  1:963987/150‑1 (MQ=255)
                                                                                                                     ttGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGt                              >  2:869388/1‑150 (MQ=255)
                                                                                                                       ggCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTc                            <  2:365015/150‑1 (MQ=255)
                                                                                                                        gCGAGCGCAAGGCTGAAGCAGCCAAGCTCAAGGAGCTGACCAGCAAGGCATGGACCCTGGCAGAGCTGGTGGAGGGCGGCCGCAAGGGCTACCACACCACCTGCGTGCCCTGTCACCAGGCCGAAGGCCAGGGCCAGCCGCCAGTGTTcc                           <  2:531630/150‑1 (MQ=255)
                                                                                                                         cGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAg                                                                                           <  2:1331975/85‑1 (MQ=255)
                                                                                                                         cGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAg                                                                                           >  1:1331975/1‑85 (MQ=255)
                                                                                                                             cgcAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGc                                                        >  1:764340/1‑116 (MQ=255)
                                                                                                                             cgcAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGc                                                        <  2:764340/116‑1 (MQ=255)
                                                                                                                                      gAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTCCCGGCGCTCAAAGGc             >  1:468585/1‑150 (MQ=255)
                                                                                                                                        aGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTgg                                                                     <  1:325730/92‑1 (MQ=255)
                                                                                                                                        aGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTgg                                                                     >  2:325730/1‑92 (MQ=255)
                                                                                                                                        aGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTCCCGGCGCTCAAAGGCTc           >  1:1362771/1‑150 (MQ=255)
                                                                                                                                         gccgccAAGCTaggtgtcgtcatccggctgggacttgacctcgaccaccaccggcatgaagccgtgattgagtccgcacagctcggtgcactggccgcggtagatgcctggcttttcgatccgggtccaggcttcgttgacaaagcctgg          >  1:247489‑M2/1‑11 (MQ=255)
                                                                                                                                         gccgccAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAAt                                <  1:1270738/128‑1 (MQ=255)
                                                                                                                                         gccgccAAGCGCAAGGAGCTGACCAGCAAGGAATGGACCCGGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAAt                                >  2:1270738/1‑128 (MQ=255)
                                                                                                                                            cgccAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAg                                                          <  2:1119390/100‑1 (MQ=255)
                                                                                                                                            ccccAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAg                                                          >  1:1119390/3‑100 (MQ=255)
                                                                                                                                                  gCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTCCCGGCGCTCAAAGGCTCGAAGATTGc  <  1:647788/150‑1 (MQ=255)
                                                                                                                                                   cTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGt                                                                >  1:779225/1‑87 (MQ=255)
                                                                                                                                                   cTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGt                                                                <  2:779225/87‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCCGGATCGAAAAGCCAGGCATCTACCGCGGCCAGTGCACCGAGCTGTGCGGCAAGGACCACGGCTTCATGCCGGTGGTGGTCGAGGTCAAGTCCAAGGCGGATTACGACACCTGGCTTGGCGAGCGCAAGGCTGAAGCCGCCAAGCTCAAGGAGCTGACCAGCAAGGAATGGACCCTGGAAGAGCTGGTGGAGCGCGGCGACAAGGTCTACCACACCACCTGCGTGGCCTGTCACCAGGCCGAAGGCCAGGGCCTGCCGCCAATGTTCCCGGCGCTCAAAGGCTCGAAGATTGC  >  NC_002947/109444‑109738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.