New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 44508836 (0.680)10 (0.240) 8/192 NT 26.0% intergenic (+58/‑230) PP_0367/PP_0368 hypothetical protein/acyl‑CoA dehydrogenase
?NC_002947 = 445127 29 (0.710)intergenic (+97/‑191) PP_0367/PP_0368 hypothetical protein/acyl‑CoA dehydrogenase

GTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCAA  >  NC_002947/444980‑445276
                                                                                                                                                   |                                                                                                                                                     
tagctcagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCtt                                                                                                                                                     >  2:678734‑M1/83‑150 (MQ=255)
     ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                                                                                                >  1:994840‑M2/1‑143 (MQ=255)
     cagctttctgtcaaggatggactatggtgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg                                                                                                                                                >  1:967503‑M1/78‑150 (MQ=255)
            gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcc                                                                                                                                         <  2:631468‑M2/150‑15 (MQ=255)
                      ttGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCCTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAGCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctaca                                                                                                                               <  1:1358734‑M2/150‑25 (MQ=255)
                        ggCCGGATCATCGACACCTACGCCTGAATACTTGCGTCACCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaag                                                                                                                             >  1:1116525‑M2/1‑124 (MQ=255)
                         gCCGGATCATCGACACCGACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                                                                                            >  2:936883‑M2/1‑123 (MQ=255)
                            ggATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATAAGACAACAAATTTTTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCGCCTACAAGGGtt                                                                                                                         >  1:1004809/1‑150 (MQ=255)
                               tcatcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                                                                                      <  1:631468/150‑1 (MQ=255)
                                tgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCggg                                                                                                                                               >  2:61328‑M1/51‑124 (MQ=255)
                                tgccatttacgccacgaaaaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCggg                                                                                                                                               <  1:61328‑M1/74‑1 (MQ=255)
                                     acccccaCGCCTGAATCCTTGCGTCATCCCCTCTTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACACTTTTGTCTTGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatg                                                                                                                <  2:555654/144‑1 (MQ=38)
                                     acacCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCGCGGATGCGTCCGATCAGACTACACTTTGGTCTGGTCGGGCCTCTTCGCGGGGAAGCACGCTCCTACAAGGGTTTGtggcatg                                                                                                                >  2:147330/1‑150 (MQ=255)
                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                                                                                            <  2:941688‑M2/134‑28 (MQ=255)
                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaagg                                                                                                                            >  1:941688‑M2/1‑107 (MQ=255)
                                         cTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTggcatggcat                                                                                                            >  1:639574/1‑150 (MQ=255)
                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGa                                                                                                      <  2:85314/150‑1 (MQ=255)
                                               cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGATTGACTGCAAACGCGTCCGATCAGACAACACTTTTGTCTGGTCGGGACTCTTCGCGGGCAAGCCCGCTCCTACAAGCGTGTGAGGCATGGCATAACTgt                                                                                                      >  2:277060/1‑149 (MQ=37)
                                                  aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCaa                                                                                                                                            <  2:1425505‑M1/77‑1 (MQ=255)
                                                  aaatggcaaatcagtcatgccatgccacaaacCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCaa                                                                                                                                            >  1:1425505‑M1/33‑109 (MQ=255)
                                                  aaTACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                                                                                      <  1:886544/131‑1 (MQ=255)
                                                  aaTACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                                                                                      >  2:886544/1‑131 (MQ=255)
                                                          cGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCAtttt                                                                                           <  1:198627/150‑1 (MQ=255)
                                                              aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCGCGAATGCCTCCGATCAGACAAAAATTTTGTCTGGTCGGGCCTCTTTGCGGGCAAGCCCCCTCCTACAAGGGTTTGTTGGATGGCGTGACTGATTTGTCATTTTTCGt                                                                                       >  2:1306069/1‑150 (MQ=38)
                                                              aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt                                                                                       <  1:916909/150‑1 (MQ=255)
                                                               tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTTCCATTTTTcttt                                                                                      >  2:783025/1‑147 (MQ=255)
                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTTGc                                                                                    >  2:682380/1‑150 (MQ=255)
                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGc                                                                                    >  1:695452/1‑150 (MQ=255)
                                                                 cccTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGc                                                                                    >  2:32010/1‑150 (MQ=255)
                                                                      tttCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                                                                                                <  1:557981‑M2/85‑8 (MQ=255)
                                                                      tttCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgg                                                                                                                                                >  2:557981‑M2/1‑78 (MQ=255)
                                                                               ctgcctTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGGCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCAt                                                                      >  1:743236/1‑150 (MQ=255)
                                                                                   CTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCctc                                                                                                                                                       >  1:588325‑M1/1‑65 (MQ=255)
                                                                                   CTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCctc                                                                                                                                                       <  2:588325‑M1/65‑1 (MQ=255)
                                                                                    TTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTcc                                                                 <  2:722517‑M1/150‑1 (MQ=255)
                                                                                       tAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgc                                                                                                                                                  >  1:525904‑M2/1‑61 (MQ=255)
                                                                                       tAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgc                                                                                                                                                  <  2:525904‑M2/66‑6 (MQ=255)
                                                                                       TAGGGGCGGGCTTGCCCGCGAATGCGCCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTCCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATc                                                              >  2:1358734‑M1/1‑150 (MQ=255)
                                                                                          GAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt                                                           >  1:722517‑M1/1‑150 (MQ=255)
                                                                                               ggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaa                                                                                                 >  2:457597‑M2/1‑53 (MQ=255)
                                                                                               ggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaa                                                                                                 <  1:457597‑M2/107‑55 (MQ=255)
                                                                                                   tGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtc                                                      <  2:549416‑M2/146‑98 (MQ=255)
                                                                                                   tGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtc                                                      >  1:549416‑M2/1‑49 (MQ=255)
                                                                                                      ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtcggatgcc                                               <  1:1335759‑M2/150‑105 (MQ=255)
                                                                                                      ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtcggatgcc                                               <  1:1167651‑M2/150‑105 (MQ=255)
                                                                                                      ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtcggatgac                                               <  1:316606‑M2/150‑105 (MQ=255)
                                                                                                      CCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgtg                                                                                                                     >  2:964587‑M1/1‑80 (MQ=255)
                                                                                                      CCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgtg                                                                                                                     <  1:964587‑M1/80‑1 (MQ=255)
                                                                                                      CCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg                                               <  1:1111365‑M1/150‑1 (MQ=255)
                                                                                                       cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaa                                                                                                                              >  1:1282256‑M2/1‑45 (MQ=255)
                                                                                                       cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaa                                                                                                                              <  2:1282256‑M2/70‑26 (MQ=255)
                                                                                                       CGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATACTTGACAGAAAGCTGa                                              <  1:597141‑M1/150‑1 (MQ=255)
                                                                                                       CGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCGCTCAGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAACTGGCACCATAGTCCATCCTTGACAGAAAGCTGa                                              >  2:1004809‑M1/1‑150 (MQ=255)
                                                                                                         CGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGc                                            >  2:743236‑M1/1‑150 (MQ=255)
                                                                                                             tGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCCTGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg                                             <  1:100918/145‑1 (MQ=255)
                                                                                                             tGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg                                             >  2:100918/1‑145 (MQ=255)
                                                                                                                    gATCCGACAACACTTTTGTCGGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt                                 <  2:81669/150‑1 (MQ=255)
                                                                                                                     aTCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt                                >  2:780943/1‑150 (MQ=255)
                                                                                                                      tCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttc                                                         >  1:834969‑M2/1‑30 (MQ=255)
                                                                                                                      tCAGACAACAATTTTGTCTGGTCGGGCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttc                                                         <  2:834969‑M2/124‑95 (MQ=255)
                                                                                                                        aGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAAAGTAAGTTTCa                             >  2:721579/1‑150 (MQ=255)
                                                                                                                            aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca                         >  1:952583/1‑150 (MQ=255)
                                                                                                                             acaaTTTTGTCTGGTCGGGTCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa                        <  1:783025/150‑1 (MQ=255)
                                                                                                                             acaaTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa                        <  1:780943/150‑1 (MQ=255)
                                                                                                                                   ttGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGttt                  <  1:32010/150‑1 (MQ=255)
                                                                                                                                        tGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCg             <  2:695452/150‑1 (MQ=255)
                                                                                                                                             gggCCTCttcgcgggcaagcccgctcctacaaggcaggcgctgaaataggggatgacgcaagtattcaggcgtaggtgtcgatgatccggccaagcatttcgtcggatgccttgacgacctttgcgccgagctcgacttcggtcttgccc        >  2:1167651‑M2/1‑7 (MQ=255)
                                                                                                                                              ggCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCAtttt                                                                                           >  2:79364/1‑66 (MQ=255)
                                                                                                                                              ggCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCAtttt                                                                                           <  1:79364/66‑1 (MQ=255)
                                                                                                                                              ggCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATAGGCTTcc       >  1:1149605/1‑150 (MQ=255)
                                                                                                                                               gCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                                                                                      <  1:55318/38‑1 (MQ=255)
                                                                                                                                               gCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTtgt                                                                                                                      >  2:55318/1‑38 (MQ=255)
                                                                                                                                               gCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGCAAGTTTCAAACAACTGTTTGATCGGCTTCCg      >  1:1130059/1‑150 (MQ=255)
                                                                                                                                                  tctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCa   >  2:1145476/1‑150 (MQ=255)
                                                                                                                                                   ctTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGCAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCaa  <  2:1130059/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCGCCAA  >  NC_002947/444980‑445276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.