New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	449293 =	60 (1.140)	4 (0.080)	4/236	NT	6.7%	coding (461/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein
	?	NC_002947	449326 =	53 (1.050)					coding (494/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein

GGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAACATCATCCATCTGGT  >  NC_002947/449177‑449473                                                                                                                                                      |                                                                                                                                                     ggAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCCCGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCAtgtg                                                                                                                                                      >  1:98410/1‑150 (MQ=255)     ccacccgtgatgaaaatcttggtaccgctgaccttgtagctgccatcagcctggggctcggccttggtgcggatgatgcccaggtcggtgccggcatgcggctcggtcaggcACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGc                                                                                                                                                     <  1:617966‑M1/35‑1 (MQ=255)     ccacccgtgatgaaaatcttggtaccgctgaccttgtagctgccatcagcctggggctcggccttggtgcggatgatgcccaggtcggtgccggcatgcggctcggtcaggcACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGc                                                                                                                                                     >  2:617966‑M1/113‑147 (MQ=255)     aTGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTg                                                                                                                                                  >  2:1060162/1‑150 (MQ=255)        gTCACCGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGAcc                                                                                                                                               <  2:1010486/150‑1 (MQ=255)         tCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACATTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCg                                                                                                                                              >  2:610492/1‑150 (MQ=255)                                 gCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTgg                                                                                                                      >  2:762352/1‑150 (MQ=255)                                  ccTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTggg                                                                                                                     >  2:1298402/1‑150 (MQ=255)                                        cccGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTTCCTGACCGAGCCGCATGCCGGCACCGACCTGGGcat‑cat                                                                                                              <  1:886580/150‑1 (MQ=255)                                        cccGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGcat‑cat                                                                                                              >  2:1133768/1‑150 (MQ=255)                                                 gACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCAGGTGGCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCaa                                                                                                     <  2:199437/150‑1 (MQ=255)                                                  aCGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACATTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAg                                                                                                    <  1:610492/150‑1 (MQ=255)                                                        ggcGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAg                                                                                              <  2:719480/150‑1 (MQ=255)                                                         gcgcCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGc                                                                                             >  2:1247574/1‑150 (MQ=255)                                                         gcgcCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGc                                                                                             <  1:1060162/150‑1 (MQ=255)                                                             ctgcctgTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCAGAGCCCCa                                                                                         >  1:421243/1‑150 (MQ=255)                                                               gcctgTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCGGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAgg                                                                                       >  1:505983/1‑150 (MQ=255)                                                                    tCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGAt                                                                                  <  2:1141221/150‑1 (MQ=255)                                                                    tCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTCCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CCCCCGCACCAAGGCCGAGCCCCAGGCTGAt                                                                                  <  2:1026867/150‑1 (MQ=255)                                                                             gCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGc                                                                                                  <  1:213087/125‑1 (MQ=255)                                                                             gCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGc                                                                                                  >  2:213087/1‑125 (MQ=255)                                                                               ccACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTggg                                                                                                                     >  1:1383268/1‑105 (MQ=255)                                                                               ccACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTggg                                                                                                                     <  2:1383268/105‑1 (MQ=255)                                                                               ccACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACaa                                                                       <  2:773924/150‑1 (MQ=255)                                                                                cccGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAg                                                                      >  2:42388/3‑150 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGCAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACaa                                                                       <  2:936055/149‑1 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCAc                                                                                                        <  2:1418243/116‑1 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCAc                                                                                                        >  1:1418243/1‑116 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACaac                                                                      <  1:1342599/150‑2 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACaa                                                                       >  1:936055/1‑149 (MQ=255)                                                                                cACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAg                                                                      >  2:701537/1‑150 (MQ=255)                                                                                 aCGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAgg                                                                     >  1:245392/1‑150 (MQ=255)                                                                                     cAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTTGGCCAGATCCATGTGCCTGCGCGAGCCGAAAGCCGGTACCGACCTGGGGAT‑AATCCGCGGGAAGGCGGAGCACCAAGCTGATGGCAGCTACAAGGTCaa                                                                 >  2:609203/1‑149 (MQ=255)                                                                                      aGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGc                                                                <  1:977475/150‑1 (MQ=255)                                                                                               ttGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTgg                                                                                                                      >  1:719924/1‑88 (MQ=255)                                                                                               ttGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTgg                                                                                                                      <  2:719924/88‑1 (MQ=255)                                                                                               ttGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAg                                                       >  2:1184516/1‑150 (MQ=255)                                                                                                tGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGa                                                      <  1:1247574/150‑1 (MQ=255)                                                                                                 gAAGGAAAAATACCTTCCGAACATGTATGCAGGCGTTTGGACCGGCTCCATGTGCCTGGAGGAGTCGCATGACGGC‑CCCACTGATACTTACGTGCGCTCCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGACAGCGGTACCAAGAt                                                     >  1:1390958/1‑150 (MQ=255)                                                                                                    ggAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGcccc                                                                                          >  1:276304/1‑110 (MQ=255)                                                                                                    ggAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGcccc                                                                                          <  2:276304/110‑1 (MQ=255)                                                                                                     gAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTtc                                                 <  1:257719/150‑1 (MQ=255)                                                                                                        aaaTACCTTCGGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGGCTGACCGCGCCGCATGCCGGCACGGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTtcatc                                              >  2:298018/1‑150 (MQ=255)                                                                                                          aTACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGGGCCGCATGCCGGCACCGGCCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCAc                                            >  1:766933/1‑150 (MQ=255)                                                                                                               ttacGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTg                                       >  2:1236116/4‑150 (MQ=255)                                                                                                                tCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTgg                                      <  1:753588/150‑1 (MQ=255)                                                                                                                  cGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCg                                    >  2:879609/1‑150 (MQ=255)                                                                                                                   gcacatggagccggcccaaacgccggcatacatgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTgg                                      <  1:617966‑M2/112‑1 (MQ=255)                                                                                                                   gcacatggagccggcccaaacgccggcatacatgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTgg                                      >  2:617966‑M2/36‑147 (MQ=255)                                                                                                                   gAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCAt                                                                                                                                      <  1:1323341/52‑1 (MQ=255)                                                                                                                   gAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCAt                                                                                                                                      >  2:1323341/1‑52 (MQ=255)                                                                                                                     acatggagccggcccaaacgccggcatacatgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGa                                                                                   >  2:222091‑M2/34‑100 (MQ=255)                                                                                                                     acatggagccggcccaaacgccggcatacatgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGa                                                                                   <  1:222091‑M2/67‑1 (MQ=255)                                                                                                                         GTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATg                                                                                 <  1:1083148‑M1/98‑1 (MQ=255)                                                                                                                         GTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATg                                                                                 >  2:1083148‑M1/1‑98 (MQ=255)                                                                                                                              ccGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGa                        <  2:505983/150‑1 (MQ=255)                                                                                                                                    tttGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTAc                                                           <  2:1352264/109‑1 (MQ=255)                                                                                                                                    tttGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTAc                                                           >  1:1352264/1‑109 (MQ=255)                                                                                                                                      tGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAAc                <  1:762352/150‑1 (MQ=255)                                                                                                                                        ggCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAg                                                                      <  1:755669/94‑1 (MQ=255)                                                                                                                                        ggCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAg                                                                      >  2:755669/1‑94 (MQ=255)                                                                                                                                        ggCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGt                                                                    <  2:634260/96‑1 (MQ=255)                                                                                                                                        ggCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGt                                                                    >  1:634260/1‑96 (MQ=255)                                                                                                                                               tCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGt                                                                    <  2:219589/89‑1 (MQ=255)                                                                                                                                               tCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGt                                                                    >  1:219589/1‑89 (MQ=255)                                                                                                                                               tCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAACATcatccat       >  1:339233/1‑150 (MQ=255)                                                                                                                                                 catgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGc                                                                <  2:374456‑M2/86‑1 (MQ=255)                                                                                                                                                 catgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGc                                                                >  1:374456‑M2/6‑91 (MQ=255)                                                                                                                                                 catgtGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAACATCATCCATCt     >  1:286402‑M2/6‑150 (MQ=255)                                                                                                                                                    gtGCCTGACCGAGCCGCCTGCCGCCGCCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAACATCATCCATCTGGt  <  2:98410‑M2/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCCATGTGCCTGACCGAGCCGCATGCCGGCACCGACCTGGGCAT‑CATCCGCACCAAGGCCGAGCCCCAGGCTGATGGCAGCTACAAGGTCAGCGGTACCAAGATTTTCATCACGGGTGGCGAACACGACCTGACCGAGAACATCATCCATCTGGT  >  NC_002947/449177‑449473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.