New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 61534444 (0.840)5 (0.100) 4/232 NT 10.3% coding (145/243 nt) xseB exodeoxyribonuclease 7 small subunit
?NC_002947 = 615356 46 (0.930)coding (133/243 nt) xseB exodeoxyribonuclease 7 small subunit

GACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATGGCGACTGTCTCGGTGG  >  NC_002947/615211‑615505
                                                                                                                                                  |                                                                                                                                                     
gACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTcagg                                                                                                                                                   <  1:205050‑M2/150‑5 (MQ=255)
gACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTcagg                                                                                                                                                   >  2:361507‑M2/1‑146 (MQ=255)
gACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTcagg                                                                                                                                                   <  1:332026‑M2/150‑5 (MQ=255)
 aCGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTcaggg                                                                                                                                                  >  2:979135‑M2/1‑145 (MQ=255)
         cTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCt                                                                                                                                          >  2:299979/1‑150 (MQ=255)
              aaCTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTc                                                                                                                                     >  2:170033/1‑150 (MQ=255)
              aaCTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTGCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTc                                                                                                                                     >  2:828694/1‑150 (MQ=255)
                  ggCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGACCCGTGACTGCagggcgccctggcccaggccg                                                                                                                                   >  1:18250‑M2/1‑129 (MQ=255)
                     cTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAggcg                                                                                                                              <  1:170033/150‑1 (MQ=255)
                     cTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAggcg                                                                                                                              <  1:299979/150‑1 (MQ=255)
                              gCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGAc                                                                                                                     <  2:205050/150‑1 (MQ=255)
                              gCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGAc                                                                                                                     >  1:203393/1‑150 (MQ=255)
                               ccAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAAGTTCCACTTTCTGTTCGGCCTGGGCCAGGGCGCCCCGGGTGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGAcc                                                                                                                    >  1:661592/1‑149 (MQ=255)
                                  aTCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCtt                                                                                                                 <  1:316540/150‑1 (MQ=255)
                                   tCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTc                                                                                                                <  1:839211/150‑1 (MQ=255)
                                         ttCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGa                                                                                                          <  2:203393/150‑1 (MQ=255)
                                             ggCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAAc                                                                                                      <  1:1083385/150‑1 (MQ=255)
                                              gCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACt                                                                                                     <  2:927019/150‑1 (MQ=255)
                                              gCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACt                                                                                                     >  1:497590/1‑150 (MQ=255)
                                                tCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACaa                                                                                                       <  2:768081/146‑1 (MQ=255)
                                                tCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACaa                                                                                                       >  1:768081/1‑146 (MQ=255)
                                                 ccGCGTCGAAGGGTTGGGCAGCCAGTTCGTCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGACCCGTGACTGCagggcgccctggcccaggccgaa                                                                                                                                 >  1:375142‑M2/1‑98 (MQ=255)
                                                 ccGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGACCCGTGACTGCagggcgccctggcccaggccgaa                                                                                                                                 <  2:375142‑M2/121‑24 (MQ=255)
                                                   gcgTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCg                                                                                                >  2:527767/1‑150 (MQ=255)
                                                            ggTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCtt                                                                                                                                         >  1:717281/1‑100 (MQ=255)
                                                            ggTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCtt                                                                                                                                         <  2:717281/100‑1 (MQ=255)
                                                                   cAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGa                                                                                <  2:1369420/150‑1 (MQ=255)
                                                                     gCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGAcc                                                                              >  1:1179781/1‑150 (MQ=255)
                                                                        aGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGt                                                                           >  2:173157/1‑150 (MQ=255)
                                                                          ttCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGc                                                                         >  2:1029825/1‑150 (MQ=255)
                                                                               cGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCa                                                                    >  1:524542/1‑150 (MQ=255)
                                                                                          agcagAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         >  1:104562/1‑150 (MQ=255)
                                                                                          agcagAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         <  1:937348/150‑1 (MQ=255)
                                                                                            cagAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGa                                                       >  1:76584/1‑150 (MQ=255)
                                                                                                  ttGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTc                                                 <  2:76584/150‑1 (MQ=255)
                                                                                                          tCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGAGATGAATTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCga                                         <  1:87764/150‑1 (MQ=255)
                                                                                                           cTGTGCGGCCGGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGTCTCTTCCTGCGAAAACTCGCCGTTCTCCAGGTTCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCgag                                        <  2:964378/150‑1 (MQ=255)
                                                                                                              ttCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTtct                                                                                            >  2:358502/1‑95 (MQ=255)
                                                                                                              ttCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTtct                                                                                            <  1:358502/95‑1 (MQ=255)
                                                                                                                    cTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGtt                                                                                                                                      >  2:990907/1‑47 (MQ=255)
                                                                                                                    cTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGtt                                                                                                                                      <  1:990907/47‑1 (MQ=255)
                                                                                                                     actgCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         <  1:597878/120‑1 (MQ=255)
                                                                                                                     actgCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         >  2:597878/4‑123 (MQ=255)
                                                                                                                          cAGGGCGCCCTGGCAGTCACGGGTcagggcgccctggcccaggccgaacagaaggtgcaaattctgctggagcgcgacggcgaactggctgcccaacccttcgacgcggagccggaagcatgattggcacctatca                                       <  1:1064064‑M2/136‑113 (MQ=255)
                                                                                                                          cAGGGCGCCCTGGCAGTCACGGGTcagggcgccctggcccaggccgaacagaaggtgcaaattctgctggagcgcgacggcgaactggctgcccaacccttcgacgcggagccggaagcatgattggcacctatca                                       >  2:1064064‑M2/1‑24 (MQ=255)
                                                                                                                          cAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCgaggg                                      <  2:1238826/137‑1 (MQ=255)
                                                                                                                          cAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCgaggg                                      >  1:1238826/1‑137 (MQ=255)
                                                                                                                          cAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCg                         >  1:239748/1‑150 (MQ=255)
                                                                                                                                 cccTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATg                  <  2:718476/150‑1 (MQ=255)
                                                                                                                                  ccTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATgg                 >  1:820856/1‑150 (MQ=255)
                                                                                                                                  ccTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATgg                 >  1:472025/1‑150 (MQ=255)
                                                                                                                                      gCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         >  1:262880/1‑106 (MQ=255)
                                                                                                                                      gCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAgg                                                         <  2:262880/106‑1 (MQ=255)
                                                                                                                                      gCAGTCACGGCTCAGCACGATGCCCTGTTCAAATTCCGTCATCGACTGTTCTACCTGAAACTCGCCGTTTTCCAAGCGCTCGACCACTGCTTGCAGGTCTCCGACGGATTGCTCGAAATCTAGCGATTCTTTTTTGCGGGCCATGGCGAc             <  2:581068/150‑1 (MQ=255)
                                                                                                                                             aCGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATGGCGACTGtctc       >  1:919290/1‑150 (MQ=255)
                                                                                                                                               gggTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATGGGGACTggcgctg     <  2:524542/150‑7 (MQ=255)
                                                                                                                                                  tCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATGGCGACTGTCTCGGTgg  <  2:919290/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCATGCTTCCGGCTCCGCGTCGAAGGGTTGGGCAGCCAGTTCGCCGTCGCGCTCCAGCAGAATTTGCACCTTCTGTTCGGCCTGGGCCAGGGCGCCCTGGCAGTCACGGGTCAGGGCGATGCCTTGTTCAAAGGCGGCCAGCGACTCTTCCAGCGACAACTCGCCGTTCTCCAGGCGCTCGACCAGTGCTTGCAGGTCTGCGAGGGATTGCTCGAAATCGAGGGAGGCTTTTTTGCGGGCCATGGCGACTGTCTCGGTGG  >  NC_002947/615211‑615505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.