New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 668084	33 (0.630)	4 (0.090)	4/198	NT	11.0%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668153	38 (0.900)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein

CAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGC  >  NC_002947/668010‑668293                                                                                                                                                |                                                                                                                                              gaagGGGAGATGACGGTGAGAGCCCGGTAGAGAGCCGCTCTACGCGGAAAGTGTGGGAGGGGCCTGGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga                                                                                                                                         >  2:257293‑M2/2‑144 (MQ=255)      ggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa                                                                                                                                    >  1:1359502‑M2/1‑139 (MQ=255)                 gatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCca                                                                                                                         <  1:464839‑M1/115‑1 (MQ=255)                    aaGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaa                                                                                                                      >  2:1243632/1‑150 (MQ=255)                     agctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaaa                                                                                                                     >  2:464839‑M1/32‑150 (MQ=255)                     aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGCACGCCCAGCCGCAGCTTCAAGTCAAGCGGCAAATTTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACaaa                                                                                                                     <  1:883806/150‑1 (MQ=37)                        ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc                                                                                                                  <  2:554719/150‑1 (MQ=255)                         cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                                                                                                                 >  1:1222146/1‑150 (MQ=255)                         cGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                                                                                                                 >  2:290004/1‑150 (MQ=255)                           cTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACcgc                                                                                                               <  2:1141307/150‑1 (MQ=255)                                 aCCCGCTCTACGCGGAAAGTGTGGGAGCGGACTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGAt                                                                                                        >  1:983530/1‑150 (MQ=255)                                    cGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGCCCGCGC‑AGagcgg                                                                                                     >  1:1269192/1‑146 (MQ=255)                                           cgcgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGGCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCa                                                                                              >  2:112267/1‑150 (MQ=255)                                               gAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCa                                                                                          >  1:1277315/1‑150 (MQ=255)                                                   gtgtGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCtc                                                                                      <  2:1166807/150‑1 (MQ=255)                                                      TGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGt                                                                                                    >  1:48928‑M1/1‑133 (MQ=255)                                                      TGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGt                                                                                                    <  2:48928‑M1/133‑1 (MQ=255)                                                      TGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCtcatc                                                                                   >  2:1277315‑M1/1‑150 (MQ=255)                                                          AGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGGCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCAccc                                                                               >  1:112267‑M1/1‑150 (MQ=255)                                                          AGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCGCAAAGACCGCGC‑AGATCAGTGGa                                                                                                 <  2:309339‑M1/132‑1 (MQ=255)                                                          AGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCGCAAAGACCGCGC‑AGATCAGTGGa                                                                                                 >  1:309339‑M1/1‑132 (MQ=255)                                                             GGCCTTGCGTTGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                                                                                                                 <  2:1404479‑M1/114‑1 (MQ=255)                                                             GGCCTTGCGTTGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAcc                                                                                                                 >  1:1404479‑M1/1‑114 (MQ=255)                                                                 ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcc                                                                                                                           >  1:1095405‑M2/1‑80 (MQ=255)                                                                 ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcc                                                                                                                           <  2:1095405‑M2/100‑21 (MQ=255)                                                                 TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCGCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGccc                                                                        <  1:1024754‑M1/150‑1 (MQ=255)                                                                 TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGccc                                                                        <  1:411806‑M1/150‑1 (MQ=255)                                                                    CGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAg                                                                     <  2:1116964‑M1/150‑1 (MQ=255)                                                                     gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCTTCTCTCGACGCAAGGCCGCTCAAAAACAG‑CTGGGCGAGTGTTTTGGATCACCCAGCTCATCACCCACAGCCCCAGc                                                                    >  1:1027273/1‑150 (MQ=21)                                                                          gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgc                                                                   <  1:1272144‑M2/147‑77 (MQ=255)                                                                          gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgc                                                                   >  2:1272144‑M2/1‑71 (MQ=255)                                                                               ggCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga                                                          <  2:1213066/150‑1 (MQ=255)                                                                               ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga                                                          >  2:1405453/1‑150 (MQ=255)                                                                                gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgccc                                                          <  2:984119‑M2/150‑86 (MQ=255)                                                                                   gCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat                                                      >  1:1263176/1‑150 (MQ=255)                                                                                   gCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat                                                      >  2:214645/1‑150 (MQ=255)                                                                                     aaaGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTc                                                    >  2:833595/1‑150 (MQ=255)                                                                                        gCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCGCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa                                                 <  2:1024754/150‑1 (MQ=255)                                                                                        gCGGCCCCGACAATCCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCATCCCAGTCGCCACGCAAGGCCGCTCCCCCAACCACAGCCC‑ACATCAGTCGATTACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa                                                 <  2:121016/150‑1 (MQ=255)                                                                                         cGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAg                                                <  1:1116964/150‑1 (MQ=255)                                                                                           gCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcccacggcctgcag                                               >  1:984119‑M2/1‑54 (MQ=255)                                                                                             cccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatg                                            >  2:285246/1‑150 (MQ=255)                                                                                              ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga                                                          <  2:429375/135‑1 (MQ=255)                                                                                              ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga                                                          >  1:429375/1‑135 (MQ=255)                                                                                              ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga                                           >  2:1145482/1‑150 (MQ=255)                                                                                               cGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatgat                                          >  2:1301089/1‑150 (MQ=255)                                                                                                gACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATc                                         >  1:50999/1‑150 (MQ=255)                                                                                                   aaTTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAg                                      <  1:1301089/150‑1 (MQ=255)                                                                                                     ttCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGgc                                    <  2:411806/150‑1 (MQ=255)                                                                                                               gAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAAt                          >  1:164006/1‑150 (MQ=255)                                                                                                                   cTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGGAACCCAACGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCNGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATgcgc                      <  1:964837/150‑1 (MQ=255)                                                                                                                     gAAAGCCTGGGGGTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCGCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATTCATGcgcgc                    <  2:348573/150‑2 (MQ=255)                                                                                                                       aaGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAt                  <  1:214645/150‑1 (MQ=255)                                                                                                                        aGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAtt                 <  2:1222146/150‑1 (MQ=255)                                                                                                                           cgggggCTGCTTTGGCGCAGTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACATAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc              <  1:141600/148‑1 (MQ=255)                                                                                                                           cTGGGGCTGCTGTGCAGCCTTGTCGCGACGCAAGGCCCCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCNAGATGANTCAGAGGATGATNGAGGCGCGCATGAATGCGCGGATTGcc              <  1:1145482/150‑1 (MQ=255)                                                                                                                                  tgctgTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAca       >  2:1288682/1‑150 (MQ=255)                                                                                                                                     tgtgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAcagca    >  1:926954/1‑150 (MQ=255)                                                                                                                                     acagCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCtcatca                                                                                  <  1:419172/69‑1 (MQ=255)                                                                                                                                     acagCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCtcatca                                                                                  >  2:419172/4‑72 (MQ=255)                                                                                                                                     acagCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAcagca    <  2:331087/147‑1 (MQ=255)                                                                                                                                       tgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACagcagc  <  1:1405453/150‑1 (MQ=255)                                                                                                                                              cTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGa            >  1:646070/1‑133 (MQ=255)                                                                                                                                              cTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGa            <  2:646070/133‑1 (MQ=255)                                                                                                                                                |                                                                                                                                              CAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGC‑AGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGC  >  NC_002947/668010‑668293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.