New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1187301	45 (0.860)	3 (0.060)	3/224	NT	6.8%	coding (2500/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
	?	NC_002947	= 1187350	41 (0.860)					coding (2549/3900 nt)	purL	phosphoribosylformylglycinamidine synthase

GCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGC  >  NC_002947/1187211‑1187494                                                                                                                                            |                                                                                                                                                 gCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGACCCTAGCGGACCTGGGCCGCTGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATcgcggcccag                                                                                                                                        >  1:173498‑M2/1‑140 (MQ=255)    ccGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCa                                                                                                                                     >  2:201806/1‑150 (MQ=255)     cGGTCACCGACATCCGCAAGACCCTGCCCACGCAAATGTGCCGCTACAGGGGCGAGACCGACCTGATCCTGTTTCACCGTGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCAc                                                                                                                                    <  1:319097/150‑1 (MQ=255)         cACCGACATCCGCAAGACCCTGACCCCGCAACTGAGCATAGACAATGACACGACCGACCTGATCCTGATCTACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGa                                                                                                                                >  1:958719/1‑150 (MQ=255)              aCATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACGGCGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTcg                                                                                                                           <  1:13550/150‑1 (MQ=255)                   cGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACAGGACGTCgacgac                                                                                                                      >  1:848444/1‑150 (MQ=255)                    gCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGacgacg                                                                                                                     >  2:567722/1‑150 (MQ=255)                      aaGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGcc                                                                                                                   <  2:905808/150‑1 (MQ=255)                         aCCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGaa                                                                                                                <  1:201806/150‑1 (MQ=255)                            cTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGAc                                                                                                             >  1:284214/1‑150 (MQ=255)                                 cccACAAATGTGCACGGACAAGGGCGAGACCGACCTGATCCTGATTGATCTGGGCCACCGCAAACACCGCAGCGGCGCCTCGATCATGGGCCAGCCCTTCCGCAAGATCGCGCCCTAGGCAGCGGGCGTCGATGACGCCGAAGCGCTCaa                                                                                                        <  2:345086/150‑1 (MQ=255)                                   cGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATcgcgg                                                                                                                                             >  1:1039924‑M2/1‑106 (MQ=255)                                   cGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATcgcgg                                                                                                                                             <  2:1039924‑M2/111‑6 (MQ=255)                                    gCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCGACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGc                                                                                                     <  2:904901/150‑1 (MQ=255)                                      aaCTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCt                                                                                                           >  1:69269/1‑142 (MQ=255)                                      aaCTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCt                                                                                                           <  2:69269/142‑1 (MQ=255)                                         tGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACAGGACGTCGACGACGCCGAAGACCTCAAGGCcttct                                                                                                <  2:848444/150‑1 (MQ=255)                                          gcgcATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCg                                                                                                                                  <  2:172426/115‑1 (MQ=255)                                          gcgcATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCg                                                                                                                                  >  1:172426/1‑115 (MQ=255)                                            gcATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCg                                                                                             >  1:56971/1‑150 (MQ=255)                                              aTGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGcc                                                                                           >  1:845670/1‑150 (MQ=255)                                                  aCAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCg                                                                                          <  1:815629/147‑1 (MQ=255)                                                  aCAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCg                                                                                          >  2:815629/1‑147 (MQ=255)                                                      gggCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCa                                                                                   >  1:734594/1‑150 (MQ=255)                                                                gaccTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAAc                                                                         <  2:845670/150‑1 (MQ=255)                                                                         ctgatcGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGc                                                                >  1:265703/1‑150 (MQ=255)                                                                          tgatcGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGcc                                                               >  1:1115896/1‑150 (MQ=255)                                                                                aCCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATcgcggcccaggtcgatcaggatcaggtcggtctcgcccttgtccatgcgcagttgcggggtcagggtcttgcggatgtcggtgaccggg                                                         <  1:1158776‑M2/150‑90 (MQ=255)                                                                                 ccTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACctgct                                                        <  1:1406078/150‑1 (MQ=255)                                                                                      gCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATcgcggcccaggtcgatcaggatcaggtcggtctcgcccttgtccatgcgcagttgcggggtcagggtcttgcggatgtcggtgaccggggcgaag                                                   <  2:245790‑M2/150‑96 (MQ=255)                                                                                       ccGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTa                                                  >  1:442453/1‑150 (MQ=255)                                                                                         gcgGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTAcc                                                >  2:1187339/1‑150 (MQ=255)                                                                                             cAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGa                                            <  1:115069/150‑1 (MQ=255)                                                                                             cAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGa                                            >  2:282836/1‑150 (MQ=255)                                                                                                 aaCCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGt                                        >  2:319495/1‑150 (MQ=255)                                                                                                            cgcCTCGATCCTGGCCCAGACCTACGGCAAGATcgcggcccaggtcgatcaggatcaggtcggtctcgcccttgtccatgcgcagttgcggggtcagggtcttgcggatgtcggtgaccggggcgaagccggtgatgatcagcgacatcg                             >  2:1158776‑M2/1‑33 (MQ=255)                                                                                                             gcCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACggcggc                            <  2:1299830/150‑1 (MQ=255)                                                                                                                     ccTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGcccagtcac                    <  2:734594/150‑8 (MQ=255)                                                                                                                       tGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTcacca                  <  2:265703/150‑1 (MQ=255)                                                                                                                        ggCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCgacgac                                                                                                                      <  1:1073767/49‑1 (MQ=255)                                                                                                                        ggCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCgacgac                                                                                                                      >  2:1073767/1‑49 (MQ=255)                                                                                                                         gCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCaccacc                <  2:1220082/150‑1 (MQ=255)                                                                                                                           ccAGACCTACGGCAAGATCGCGGCCCAGGCACGGGACGTCGACGACGCCGAAGACCTCAAGGCGTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCTAAGGCGGCCTGGTCACCACCGt              >  2:603384/1‑150 (MQ=255)                                                                                                                                    cGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAAt     >  2:284614/1‑150 (MQ=255)                                                                                                                                     ggCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTcacca                  <  1:1018725/136‑1 (MQ=255)                                                                                                                                     ggCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTcacca                  >  2:1018725/1‑136 (MQ=255)                                                                                                                                     ggCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCACAGACCCTCTTCCCTTCTTCGCCGTGATCCAGAACTGGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATg    <  1:319495/150‑1 (MQ=255)                                                                                                                                       cAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCGCGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGc  <  2:570246/150‑1 (MQ=255)                                                                                                                                       cAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGc  >  2:999107/1‑150 (MQ=255)                                                                                                                                       cAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGc  <  2:56971/150‑1 (MQ=255)                                                                                                                                       cAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGc  <  1:282836/150‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                 GCCCCGGTCACCGACATCCGCAAGACCCTGACCCCGCAACTGCGCATGGACAAGGGCGAGACCGACCTGATCCTGATCGACCTGGGCCGCGGCAAAAACCGCATGGGCGCCTCGATCCTGGCCCAGACCTACGGCAAGATCGCGGCCCAGGCACCGGACGTCGACGACGCCGAAGACCTCAAGGCCTTCTTCGCCGTGATCCAGGGCCTGAACGCCGACGGCCACCTGCTGGCCTACCACGACCGTTCCGACGGCGGCCTGGTCACCACCGTGCTGGAAATGGC  >  NC_002947/1187211‑1187494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.