| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2100025 | 37 (0.700) | 13 (0.300) | 12/200 | NT | 28.9% | intergenic (‑93/‑112) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| ? | NC_002947 | = 2100074 | 34 (0.800) | intergenic (‑142/‑63) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein | |||||
CCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACG > NC_002947/2099935‑2100216 | ccGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGCGcgg < 2:230122‑M2/143‑4 (MQ=255)ccGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgg > 1:230122‑M2/1‑140 (MQ=255) aaTAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgc > 1:1117796‑M2/1‑137 (MQ=255) tAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCCGTTGATCCCCCAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcgg < 1:959326‑M2/150‑16 (MQ=255) aGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTCTGCGGCTAACCGTTTGCCGCTTGGCGCCCCTCCGCTTGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcgga > 1:1027578‑M2/1‑134 (MQ=255) ccccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagg > 1:913923‑M2/1‑132 (MQ=255) ccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagggg < 1:7367‑M2/150‑21 (MQ=255) gatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCgg < 1:1024298‑M1/75‑1 (MQ=255) gatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCgg > 2:1024298‑M1/58‑132 (MQ=255) cGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGCCTGCTTGGGGCCGTTCAGCTGGGGTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggc > 1:737841‑M2/1‑129 (MQ=255) tggtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGc > 1:1211794/1‑150 (MQ=255) gtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCCTGCCCGTTCCCCCAGGTCCTGCTTCGCCCCGTTGGTG‑ACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCgg > 2:1261929/1‑150 (MQ=37) gggTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGcc < 1:634776/150‑1 (MQ=255) gtctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCaaa > 2:1308991/1‑150 (MQ=255) tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTGCAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGGAAGCCCGCGGTGTGGCGCGCAGCGGCCCCCaaaaaa < 1:1261929/150‑1 (MQ=255) tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTAAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCaaaaaa > 1:666888/1‑150 (MQ=255) gtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgg > 1:743414‑M2/1‑108 (MQ=255) gtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgg < 2:743414‑M2/111‑4 (MQ=255) ttCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCaaaaaaat > 1:691681/1‑148 (MQ=255) tttCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTgaga > 1:1010409/1‑150 (MQ=255) acaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTTAACTCAAGC‑CCTGTGGGAGCgg < 1:799522‑M1/75‑1 (MQ=255) acaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCgg > 2:799522‑M1/29‑103 (MQ=255) aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGt < 2:1211794/150‑1 (MQ=255) tCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGCGcgggcaagcccgcggagggg < 2:902768‑M2/113‑21 (MQ=255) tCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagggg > 1:902768‑M2/1‑93 (MQ=255) gCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTGCCAAAGGTGCAGGTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGGCCGCGGGGGGGCGGGCGGCGGCCGCGAAAAAACTGAGCTTGTTGGGAgtc > 1:413717/1‑150 (MQ=255) gCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagg < 1:1186342‑M2/109‑19 (MQ=255) gCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagg > 2:1186342‑M2/1‑91 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgg > 1:284076‑M2/1‑83 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgg < 2:284076‑M2/86‑4 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTga < 2:1105456/128‑1 (MQ=255) ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTga > 1:1105456/1‑128 (MQ=255) cGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGTTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctc < 1:1421561/150‑1 (MQ=255) cGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctc < 2:7367/150‑1 (MQ=255) cCCCCTCCGCGGCCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑CGGCTGAACTCAAGC‑CCTGTGGGAGCAGCCAGGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATc > 2:691681‑M1/2‑150 (MQ=255) GCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATc < 1:517606‑M1/150‑1 (MQ=255) CCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGc < 2:465257‑M1/150‑1 (MQ=255) CCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCt > 1:465257‑M1/1‑150 (MQ=255) cTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGCGcgggcaagcccgcggaggggcgcgcagcggcccccacttggcgatcaact < 1:713907‑M2/116‑51 (MQ=255) cTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGCGcgggcaagcccgccgaggggcgcgcagcggcccccacttggcgatcaact > 2:713907‑M2/1‑66 (MQ=255) tCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggct < 2:270429‑M2/150‑86 (MQ=255) GCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAACACCGTAAGAGTGATAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGAc < 2:37494‑M1/150‑1 (MQ=255) TTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt > 2:128509‑M1/1‑132 (MQ=255) TTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt < 1:128509‑M1/132‑1 (MQ=255) cccGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggagtggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccgg > 1:1071867‑M2/1‑53 (MQ=255) cccGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccgg < 2:1071867‑M2/134‑82 (MQ=255) CCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg < 1:703639‑M1/142‑1 (MQ=255) CCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg > 2:703639‑M1/1‑142 (MQ=255) CCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCgcgc < 2:94484‑M1/150‑1 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcgg < 1:414822‑M2/82‑31 (MQ=255) ccGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcgg > 2:414822‑M2/1‑52 (MQ=255) CCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc < 1:494359‑M1/150‑1 (MQ=255) GTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGccc < 1:587375‑M1/83‑1 (MQ=255) GTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGccc > 2:587375‑M1/1‑83 (MQ=255) ttCCCACAGGTACAGCTTAGCCCC‑CGAATGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgcgcagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgc < 1:749495‑M2/150‑102 (MQ=255) ctCCCACAGGTCAAGCTCAGCCCC‑ACGAGGACCGCGAGCGCCGGTGGGAG‑GGGCCCCCGAGTGGAGGGCCTTGCATCTGGCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGaa < 2:666888/149‑1 (MQ=255) ccACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgca < 1:786521‑M2/150‑105 (MQ=255) ccACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGa > 2:755454/1‑137 (MQ=255) ccACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGa < 1:755454/137‑1 (MQ=255) ccACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg < 1:1308991/150‑1 (MQ=255) cacaGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctc > 1:716109/1‑117 (MQ=255) cacaGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctc < 2:716109/117‑1 (MQ=255) acaGGAACAACATAGACCC‑ATGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGt > 2:420619/1‑150 (MQ=255) aGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTAc < 1:94484/150‑1 (MQ=255) aGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTAc < 2:494359/150‑1 (MQ=255) cTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacg > 1:270429‑M2/1‑34 (MQ=255) tAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCt < 1:1329554/150‑1 (MQ=255) tAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCt < 1:420619/150‑1 (MQ=255) aGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacggga > 2:786521‑M2/1‑31 (MQ=255) cccc‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa > 1:456103/1‑150 (MQ=255) aGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAccc > 2:1116369/1‑150 (MQ=255) gCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCt < 1:1116369/150‑1 (MQ=255) cGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGcc < 2:1010409/150‑1 (MQ=255) aaGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAgg > 2:4860/1‑69 (MQ=255) aaGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAgg < 1:4860/69‑1 (MQ=255) aaGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGc > 2:440275/1‑150 (MQ=255) aGC‑CCTGTGGGAGcgggcaagcccgcggaggggcgcgcagcggcccccgctgggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggactcat > 2:749495‑M2/1‑13 (MQ=255) gC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGcac > 1:1048002/1‑150 (MQ=255) ggtggGACagggcaaccccgcggaggggcgccaagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggaatcatggaga > 2:1421561‑M2/2‑8 (MQ=255) tgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATc > 2:1425854/1‑109 (MQ=255) tgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATc < 1:1425854/109‑1 (MQ=255) gAGcgggcaagcccgcggaggggcgcgcagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggactcatgga < 1:191217‑M2/143‑141 (MQ=255) gAGcgggcaagcccgcggaggggcgcgcagcggcccccgcttggcgatcaactgaaatgaacagacagacccaccagcagccggggctattcggctatgcttgcgcagcgcaaggaacgggaaaccggctcgggactcatgga > 2:191217‑M2/1‑3 (MQ=255) | CCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCC‑AGGCTGAACGCAAGC‑CCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACG > NC_002947/2099935‑2100216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |