| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2723815 = | 63 (1.200) | 9 (0.190) | 7/226 | NT | 15.4% | coding (131/315 nt) | PP_2384 | membrane protein |
| ? | NC_002947 | 2723852 = | 41 (0.850) | coding (94/315 nt) | PP_2384 | membrane protein | |||||
CAGCACCAGGGCGATGGCTACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATGCCCAGCAGGC > NC_002947/2723706‑2724000 | cAGCACCAGGGCGATGGCTACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCGGCAGTTTTCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGa < 2:1194716/150‑1 (MQ=255)cAGCACCAGGGCGATGGCTACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGa < 1:54420/150‑1 (MQ=255) gcccgcgcatgacctggatcctgattttcgccatgggcgccatcgtgtttctcaaccgctacgcattcctggagccgcgcctgcccttgcgcctgagctcgaATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAgg > 2:1103620‑M1/103‑150 (MQ=255) aGGGCGATAGCTACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGACAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAgg > 2:340778/1‑150 (MQ=255) tACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAg > 1:1354516/1‑150 (MQ=255) gCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTc < 2:152183/150‑1 (MQ=255) cccAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTcc > 1:100137/1‑150 (MQ=255) cccAGCAAGTAGGGGTTGAGCAGACTCAGTTTCAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTcc < 2:1245978/150‑1 (MQ=255) ccAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCa < 1:146041/150‑1 (MQ=255) aagcgagTAGGGGTTGAGCAGGCTCAGGTCGAAATAGTGCACACGAACTGATATGATCGGGCCGCAGCTGGTGCGCAATGGGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAg < 1:319162/144‑1 (MQ=255) aGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGa > 2:1372981/1‑112 (MQ=255) aGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGa < 1:1372981/112‑1 (MQ=255) gTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCg < 2:100137/150‑1 (MQ=255) tGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGACCGGGACGCAGATGGCGGTGAGCATGCCCGCCCCGGCCGAGGCGAGAAAGTGCCGGGCATGTGAGCGCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGt < 2:266513/150‑1 (MQ=255) gAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGtt < 1:1257190/150‑1 (MQ=255) gCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTga > 2:674668/1‑150 (MQ=255) aGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTgaga < 2:1253691/150‑1 (MQ=255) gCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGaaa > 2:438033/1‑150 (MQ=255) gCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGaaa < 1:19813/150‑1 (MQ=255) ttGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATg < 1:238405/150‑1 (MQ=255) cTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGa > 1:143408/1‑143 (MQ=255) cTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGa < 2:143408/143‑1 (MQ=255) gtggtCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGTCTGGCCCTAGAGATCAGGAGTGGTAGCGGTCGGGTCGCCAGGAATGCGTAGCGGTTGAGAAACACGATTGCGCCCAt > 1:167990/1‑150 (MQ=255) gtggtCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCAt > 2:1112991/1‑150 (MQ=255) aGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGaa > 1:439665/1‑150 (MQ=255) ggCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGaaa < 1:1112991/150‑1 (MQ=255) gCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGaaaa < 1:438033/150‑1 (MQ=255) aTGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATc > 2:273931/1‑150 (MQ=255) aTGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCACAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATc > 2:427979/1‑150 (MQ=255) aTGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGATCACGGGTAAACCCAGCCGCGGCTCCAGGAATGAGTAGCGGTTGAAAATCACGACGGCGCCCATGGCGAAAATc > 1:386576/1‑150 (MQ=255) atgatCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGTAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATc > 2:740908/1‑150 (MQ=255) atCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGTAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAg < 1:740908/150‑1 (MQ=255) atCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAg < 1:343438/150‑1 (MQ=255) atCGGGCCGCAGATGGCGGTGAGAATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAg < 1:427979/150‑1 (MQ=255) gggCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGGGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTc > 2:972310/1‑150 (MQ=255) aGATGGCGGTGAGCCTGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGcgcg < 1:1001071/150‑1 (MQ=255) gATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCgg < 2:167990/150‑1 (MQ=255) cctgagctcgaatgcccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGc > 2:1103620‑M2/49‑150 (MQ=255) ggCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCt > 2:1134687/1‑150 (MQ=255) ggTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCg > 2:1133972/1‑150 (MQ=255) gTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCgg < 2:916193/150‑1 (MQ=255) tGAGCATGCCCGGCACGACAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGc < 1:340778/150‑1 (MQ=255) TGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGCGATCAGGACCACGGCCAGGCGCGGCTTCAGGAATCCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAAttt > 1:674668‑M1/1‑150 (MQ=255) cccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATgg < 1:1347360‑M2/72‑1 (MQ=255) cccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATgg > 2:1347360‑M2/35‑106 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAac < 1:148429‑M2/56‑1 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAac > 2:148429‑M2/34‑89 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAg > 2:1271689‑M2/34‑122 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAg < 1:1271689‑M2/89‑1 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatGCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGcc > 1:701394‑M2/34‑100 (MQ=255) ccggcagtttctcggctttgccgtgccgggcatGCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGcc < 2:701394‑M2/67‑1 (MQ=255) caAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGaa < 2:1354516/150‑1 (MQ=255) ccGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCgg > 1:974864/1‑150 (MQ=255) gagaAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTc < 2:816601/121‑1 (MQ=255) gagaAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTc > 1:816601/1‑121 (MQ=255) gagaAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGgcg > 1:239585/1‑150 (MQ=255) cTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATg < 2:386576/150‑1 (MQ=255) gggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGAAGCTGACCCCGGCGCCCATCCccaa > 2:658618‑M2/7‑149 (MQ=255) tTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATGCCca > 2:901963‑M2/2‑144 (MQ=255) tTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATGCCca < 1:901963‑M2/143‑1 (MQ=255) tTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATGCCCAGCAGGc < 1:1103620‑M2/149‑1 (MQ=255) | CAGCACCAGGGCGATGGCTACAAGGGAGCCCAGCAGGTAGGGGTTGAGCAGGCTCAGGTTGAGCTGGTGGTCAGGCATGAAGATGATCGGGCCGCAGATGGCGGTGAGCATGCCCGGCACGGCAAAGCCGAGAAACTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGCGAATTTCTGGCAGATGAACCCGGCGCTCATGCCCAGCAGGC > NC_002947/2723706‑2724000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |