New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2958272 | 62 (1.180) | 5 (0.100) | 5/230 | NT | 8.6% | coding (989/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein |
? | NC_002947 | = 2958316 | 49 (1.000) | coding (1033/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein |
CCAGGGCGAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAGGGCCGCATGA > NC_002947/2958168‑2958463 | ccAGGGCGAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGc > 1:366130‑M2/1‑149 (MQ=255) aGGGCGAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccg < 1:1075727‑M2/150‑4 (MQ=255) cGAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCCTTGTCGATGccgggca > 2:127787‑M2/1‑143 (MQ=255) gAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcag < 1:943519‑M2/150‑9 (MQ=255) gCCAACCTGCGGCTGTACGTGCACCCTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGTCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATc < 2:438241/150‑1 (MQ=255) cgcgGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGgccg < 1:407516/150‑1 (MQ=255) tGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATtg < 1:302621/150‑1 (MQ=255) aCGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTgtgc < 1:651827/150‑1 (MQ=255) gCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCgg < 1:741748/150‑1 (MQ=255) gCGTGCCATCCACGATGAGTTCATCAAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCTGGTAACCCGCTGGATCCGGTGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCgg < 1:741642/150‑1 (MQ=255) aTCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGgccgcc > 2:926158/1‑129 (MQ=255) aTCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGgccgcc < 1:926158/129‑1 (MQ=255) aTCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAagag > 2:96894/1‑150 (MQ=255) aTCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAaga > 2:41521/1‑149 (MQ=255) aTCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAaga < 1:41521/149‑1 (MQ=255) tCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATGCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAgg > 1:497969/1‑150 (MQ=255) gATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGgcgcg > 2:470484/1‑150 (MQ=255) gTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGgc > 1:770305/1‑114 (MQ=255) gTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGgc < 2:770305/114‑1 (MQ=255) ttCATCGAGCGCCTGCCGGCCAAGGCCCGCCAGTGCCTGCCGGGTAACCCGCGGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTg < 2:943519/150‑1 (MQ=255) ttCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGATACGGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTg > 1:511649/1‑150 (MQ=255) ttCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTg < 2:497969/150‑1 (MQ=255) ttCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTg > 2:804062/1‑150 (MQ=255) aTCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTgtgc > 2:1416242/1‑121 (MQ=255) aTCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTgtgc < 1:1416242/121‑1 (MQ=255) aTCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGgtg > 1:270817/1‑150 (MQ=255) aTCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGgtg > 2:1216648/1‑150 (MQ=255) cTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTggcggc < 1:96894/150‑1 (MQ=255) tGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGcc > 1:730475/1‑150 (MQ=255) tGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGcc > 2:756926/1‑150 (MQ=255) gCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGCCGGCCAGTGGGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCg > 2:398354/1‑150 (MQ=255) gCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTgg > 2:34856/1‑133 (MQ=255) gCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTgg < 1:34856/133‑1 (MQ=255) gCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGgtgt < 1:586576/136‑1 (MQ=255) gCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGgtgt > 2:586576/1‑136 (MQ=255) ccAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGcc > 1:390131/1‑150 (MQ=255) cAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcagccactggcgagccttggcctgcaggcgctcgatgaactcatcgtggatggcacgctgcacgtacagccgcgagt < 1:286391‑M2/150‑83 (MQ=255) aaGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTg < 1:1112894/150‑1 (MQ=255) cggCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGa < 2:616747/149‑1 (MQ=255) gCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGAcc > 2:105246/1‑150 (MQ=255) cTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCa < 1:1238176/150‑1 (MQ=255) cAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGaa < 2:149846/150‑1 (MQ=255) cAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTAACCATCGaa < 2:630294/150‑1 (MQ=255) aGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGCCAGTTGCGGCCGACGCCTGACCATCGAAg < 1:398354/150‑1 (MQ=255) tGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcagacactggcgagccttggcctgcaggcgctcgatgaactcatcgtggatggcacgctgcacgtacagccgcgagttggccgaacacac < 1:630102‑M2/150‑96 (MQ=255) tGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGt > 1:1252606/1‑150 (MQ=255) tGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcagccactggcgagccttggcctgcaggcgctcgatgaactcatc < 2:1030270‑M2/101‑51 (MQ=255) tGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcagccactggcgagccttggcctgcaggcgctcgatgaactcatc > 1:1030270‑M2/1‑51 (MQ=255) gCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGa > 1:335066/1‑150 (MQ=255) gCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGa < 1:1216648/150‑1 (MQ=255) ccGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGccgggcagacactggcgagccttggcctgcaggcgctcgatgaactcatcgtggatggcacgctgcacgtacagccgcgagttggccgaacacacctcgccc > 2:630102‑M2/1‑48 (MQ=255) cGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACaa > 1:1192723/1‑150 (MQ=255) ccGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGc < 2:1192723/150‑1 (MQ=255) gcgcCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCCATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCg < 2:511649/150‑1 (MQ=255) ccGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGgtg > 2:612117/1‑150 (MQ=255) ccATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAgg < 2:959129/150‑1 (MQ=255) cATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAggg > 1:713149/1‑150 (MQ=255) tCGATGCCGGGAAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAGGGCCGCa > 2:205493/1‑150 (MQ=255) cGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAGGGCCGCAt < 1:105246/150‑1 (MQ=255) aTGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAGGGCCGCATGa < 2:335066/150‑1 (MQ=255) | CCAGGGCGAGGTGTGTTCGGCCAACTCGCGGCTGTACGTGCAGCGTGCCATCCACGATGAGTTCATCGAGCGCCTGCAGGCCAAGGCTCGCCAGTGGCTGCCCGGTAACCCGCTGGATCCGGCGAGCCGCGCCGGGGCCATTGTCGATGCCGGGCAGACCGGCCGCATCGAGGCCGCCATTGTGCGTGCCGGGCAAGAGGGCGCGCGATTGGTGTGTGGCGGCCGACGCCTGACCATCGAAGGTTCGGACAACTACATCGAGCCGACCATTTTTGCCGGTGTCGAGGGCCGCATGA > NC_002947/2958168‑2958463 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |