New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3816445 =	57 (1.080)	5 (0.100)	5/236	NT	8.0%	coding (419/702 nt)	cpxR	two‑component system regulator CpxR
	?	NC_002947	3816480 =	61 (1.210)					coding (384/702 nt)	cpxR	two‑component system regulator CpxR

CAGCTGACCGGCCTGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGATGTTGT  >  NC_002947/3816333‑3816616                                                                                                                                                    |                                                                                                                                         ggagctgggggccgatgactatgtgcccaagcccagctctcccggtgagctggtggcacgcctgcgggcaatactgcgtcgcgtgcagccatacctgatgggtgaaaccagcGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCt                                                                                                                                        >  1:1044185‑M1/113‑150 (MQ=255)    gctgggggccgatgactatgtgcccaagcccagctctcccggtgagctggtggcacgcctgcgggcaatactgcgtcgcgtgcagccatacctgatgggtgaaaccagcGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGt                                                                                                                                     >  2:1023210‑M1/110‑150 (MQ=255)        ccGGCCTGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCa                                                                                                                                 <  1:1219049/150‑1 (MQ=255)        ccGGCCTGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCa                                                                                                                                 >  2:1219049/1‑150 (MQ=255)         agcccTGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTGCCTGTTCAGGTACCTCGGGCGCGCTGGTTTCAc                                                                                                                                >  2:412807/4‑150 (MQ=255)              tGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATc                                                                                                                           >  1:216614/1‑150 (MQ=255)                   cgcCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTa                                                                                                                      <  2:897824/150‑1 (MQ=255)                     ccAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATg                                                                                                                    <  2:1101393/150‑1 (MQ=255)                            ttCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGCGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCAc                                                                                                             >  1:839215/1‑150 (MQ=255)                               gcgcaggcagAATGGGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCAcgcg                                                                                                          >  2:707809/3‑150 (MQ=255)                                    ggCGGAACGCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCa                                                                                                     >  2:380689/1‑150 (MQ=255)                                     gCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAg                                                                                                    >  1:1133709/1‑150 (MQ=255)                                       tGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCCGGCACGCTGATATTAGTCATTAGGTAGAGCGGCACGCGACGCAGTa                                                                                                  >  2:514442/1‑150 (MQ=255)                                            tCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTg                                                                                                                                       >  2:243936/1‑108 (MQ=255)                                            tCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTg                                                                                                                                       <  1:243936/108‑1 (MQ=255)                                            tCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGACTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCACGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGcc                                                                                             >  1:1362710/1‑150 (MQ=255)                                              ggAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGtt                                                                                                                                    >  1:1326062/1‑109 (MQ=255)                                              ggAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGtt                                                                                                                                    <  2:1326062/109‑1 (MQ=255)                                                    ggTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCg                                                                                     >  1:1016302/1‑150 (MQ=255)                                                     gTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGt                                                                                    <  1:514442/150‑1 (MQ=255)                                                     gTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGCGCAAGAGCGTCGTGTCGGTCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGt                                                                                    >  2:37783/1‑150 (MQ=255)                                                      tCAATTCCATCGTGTCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTg                                                                                   >  2:1091031/1‑150 (MQ=255)                                                      tCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTg                                                                                   >  1:46608/1‑150 (MQ=255)                                                        aaTTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGcc                                                                                 >  1:700404/1‑150 (MQ=255)                                                            ccAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGccacca                                                                             <  2:471972/150‑1 (MQ=255)                                                                    gCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCg                                                                     >  2:293361/1‑150 (MQ=255)                                                                    gCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCg                                                                     >  2:1039088/1‑150 (MQ=255)                                                                      tGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGCCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCggg                                                                   >  2:265971/1‑150 (MQ=255)                                                                      tGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATCTTCAATACGCAACTCCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCggg                                                                   >  1:217336/1‑150 (MQ=255)                                                                         gcCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGgaga                                                                >  2:763459/1‑150 (MQ=255)                                                                              aGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTgg                                                           <  1:763459/150‑1 (MQ=255)                                                                                  cgcCTCGCGCTGCCCCGGCCACAGTTTCACTGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCtt                                                       <  2:386887/150‑1 (MQ=255)                                                                                  cgcCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCtt                                                       <  1:1323016/150‑1 (MQ=255)                                                                                   gcCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTAAGGTACCTCGGGCGACCTGATTCCATCCAACAGCTATCCCTCGCCGCGACGCAGTGCTGGCCGCAGGTATGCCACCAGCTCACCGGGAGAGCTGGGCTTg                                                      <  2:872910/150‑1 (MQ=255)                                                                                     cTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATc                                                                                                                           <  2:907153/79‑1 (MQ=255)                                                                                     cTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATc                                                                                                                           >  1:907153/1‑79 (MQ=255)                                                                                     cTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTgg                                                           >  1:870265/1‑143 (MQ=255)                                                                                     cTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTgg                                                           <  2:870265/143‑1 (MQ=255)                                                                                     cTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCACTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTggg                                                    >  2:1017539/1‑150 (MQ=255)                                                                                          gccgccCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTa                                                                                                  >  1:169073/1‑99 (MQ=255)                                                                                          gccgccCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTa                                                                                                  <  2:169073/99‑1 (MQ=255)                                                                                              ccccGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTc                                           >  1:931065/1‑150 (MQ=255)                                                                                                    ccACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGc                                     <  1:1091031/150‑1 (MQ=255)                                                                                                      acaTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGt                                                                                                                                     >  1:252573/1‑52 (MQ=255)                                                                                                      acaTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGt                                                                                                                                     <  2:252573/52‑1 (MQ=255)                                                                                                        aTTTTCAATGCGCGACTGCGTACCTGTTCAGGTACCTCGTGCGCGCTGGTTTCACCCATAAGGTATGGCTGCACGCGAGGCAGTATTGCCCGCAGGAGTGTGATCAGCTCACCGGGAGTGATGGTCTTGGGAACATAGTGATAGAcccgc                                 >  2:551855/1‑148 (MQ=255)                                                                                                        aTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTAt                                                                                                                     >  1:1402122/1‑66 (MQ=255)                                                                                                        aTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTAt                                                                                                                     <  2:1402122/66‑1 (MQ=255)                                                                                                        aTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGccccc                                 >  2:1270033/1‑150 (MQ=255)                                                                                                        aTTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGccccc                                 >  2:1422742/1‑150 (MQ=255)                                                                                                           accagcgcgcccgaggtacctgaacaggtacgcagtggcgcGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGc                              >  2:1023210‑M2/42‑150 (MQ=255)                                                                                                              agcgcgcccgaggtacctgaacaggtacgcagtggcgcGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTcc                           >  1:1044185‑M2/39‑150 (MQ=255)                                                                                                                tGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAg                         <  1:1039088/150‑1 (MQ=255)                                                                                                                tGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAg                         >  1:446089/1‑150 (MQ=255)                                                                                                                     ccgaggtacctgaacaggtacgcagtggcgcGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTgg                                                     >  2:48659‑M2/32‑117 (MQ=255)                                                                                                                     ccgaggtacctgaacaggtacgcagtggcgcGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTgg                                                     <  1:48659‑M2/86‑1 (MQ=255)                                                                                                                       cgaggTACCTGAACAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCa                  >  1:1288938/5‑150 (MQ=255)                                                                                                                         gCGTACCTGTTCAGGTACCTCGGGCGCACTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAAt                <  1:1017539/150‑1 (MQ=255)                                                                                                                           gTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGccccc                                 <  1:165018/131‑1 (MQ=255)                                                                                                                           gTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGccccc                                 >  2:165018/1‑131 (MQ=255)                                                                                                                            tACCTGAACAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCg             <  2:1288938/150‑1 (MQ=255)                                                                                                                              ccTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGt           <  1:1270033/150‑1 (MQ=255)                                                                                                                                  ttCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAt       <  1:380689/150‑1 (MQ=255)                                                                                                                                  ttCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAt       <  2:839215/150‑1 (MQ=255)                                                                                                                                  ttCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAt       <  2:216614/150‑1 (MQ=255)                                                                                                                                     ggtacgcagtggcgcGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAtgtt    <  2:1044185‑M2/135‑1 (MQ=255)                                                                                                                                     aGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCTCGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAtgtt    >  2:257538/1‑150 (MQ=255)                                                                                                                                     aGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAtttt    <  1:1426556/150‑1 (MQ=255)                                                                                                                                     aGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAtgtt    <  1:412807/150‑1 (MQ=255)                                                                                                                                       gTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTTGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGAtgttgt  >  2:1229912/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                         CAGCTGACCGGCCTGGCGCGCCAGGGCTTCGAGCAGGCTGAACTCGGAGCCGGTCAATTCCAGCGTGGCTGCGCCCCAGCGCGCCTCGCGCCGCCCCGGCCACATTTTCAATGCGCCACTGCGTACCTGTTCAGGTACCTCGGGCGCGCTGGTTTCACCCATCAGGTATGGCTGCACGCGACGCAGTATTGCCCGCAGGCGTGCCACCAGCTCACCGGGAGAGCTGGGCTTGGGCACATAGTCATCGGCCCCCAGCTCCAGGCCGGCAATGCGGTCGATGTTGT  >  NC_002947/3816333‑3816616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.