New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4167412	43 (0.820)	4 (0.080)	4/232	NT	7.7%	coding (108/1212 nt)	creA	creatinase
	?	NC_002947	= 4167439	55 (1.110)					coding (81/1212 nt)	creA	creatinase

GTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑GCCTGAGAAGCATTGCAAC  >  NC_002947/4167308‑4167582                                                                                                                                    |                                                                                                                                                 gTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGa                                                                                                                                <  2:471293/150‑1 (MQ=255)          aGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAg                                                                                                                       >  2:728939/1‑150 (MQ=255)          aGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAg                                                                                                                       <  2:705525/150‑1 (MQ=255)                tAAGGGAGGCCGAACGAGCAGTAAAGGAACTCGCTGAAATAGTTGACGTTGTGATACGAGCTGAAGATTGCCGCCTCGATGTCTTGCGCTGCCATATAGGCCCGCAGCCGGGCGTGCCGAGCAACGTATTCCTCAACGGAAAAGGTTGGc                                                                                                                 >  2:181711/1‑150 (MQ=255)                           gAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGaaaa                                                                                                                        >  2:329282/1‑132 (MQ=255)                           gAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGaaaa                                                                                                                        <  1:329282/132‑1 (MQ=255)                               gAGCAGTAAAGGAAATCGCTGTAATAGTTGAAGTTGTGATAAGAGGTGAAGATTGCCGGCTCGATGTCGTACTAGGCCAAATAGGCACGCAGCCGGGGCTCGCGAGCAGCGTATTGCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCa                                                                                                  >  2:380325/1‑150 (MQ=255)                                    gTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCCGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCg                                                                                             >  2:153360/1‑150 (MQ=255)                                    gTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCg                                                                                             >  2:1109754/1‑150 (MQ=255)                                            aaTCTCTGTAATAGTTGACGTTGTGATACGAGGTGAACATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                     <  1:636953/150‑1 (MQ=255)                                                gCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGt                                                                                 >  2:117438/1‑150 (MQ=255)                                                   gTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTGGTCGCCATTGCGGATTTTCAGCGTCtt                                                                              <  2:547394/150‑1 (MQ=255)                                                     aaTAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTgg                                                                            <  1:1110782/150‑1 (MQ=255)                                                     aaTAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCAATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTgg                                                                            <  1:728939/150‑1 (MQ=255)                                                        aGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCa                                                                         >  2:228136/1‑150 (MQ=255)                                                          ttGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCAtt                                                                       >  1:498968/1‑150 (MQ=255)                                                              cGTTGTGATACGAGGTGAAGATTGCCGCTTCGATGTCCTGCTTGGCCATATACGCGCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGGAAAGGTTGGCTGCACTTTGTCGACAGTGCGGTTTTTCATGTTCTTCGGCATTTGCa                                                                   >  2:466858/1‑150 (MQ=255)                                                                  gtgATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGt                                                               >  2:1216867/1‑150 (MQ=255)                                                                      tACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                                                           <  1:1216867/150‑1 (MQ=255)                                                                         gAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTg                                                                             >  2:474854/1‑129 (MQ=255)                                                                         gAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTg                                                                             <  1:474854/129‑1 (MQ=255)                                                                          aGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGa                                                                                           >  2:924247/1‑114 (MQ=255)                                                                          aGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGa                                                                                           <  1:924247/114‑1 (MQ=255)                                                                          aGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTc                                                       <  1:1109754/150‑1 (MQ=255)                                                                            gTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCt                                                     >  2:1241549/1‑150 (MQ=255)                                                                             tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCtt                                                    >  2:1408460/1‑150 (MQ=255)                                                                             tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCtt                                                    <  1:117438/150‑1 (MQ=255)                                                                             tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCtt                                                    <  1:16284/150‑1 (MQ=255)                                                                             tGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAATTTAAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCtt                                                    >  2:588317/1‑150 (MQ=255)                                                                              gAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAgg                                                                                   >  1:432187/1‑118 (MQ=255)                                                                              gAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAgg                                                                                   <  2:432187/118‑1 (MQ=255)                                                                                   ttGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTCGCGCTGTTCATGGTCGGGGTTCCTTGTCGtt                                              <  1:970042/150‑1 (MQ=255)                                                                                     gcccccTCTATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCGGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTtgt                                            <  1:380325/150‑1 (MQ=255)                                                                                        gccTCGATGTCCTGCGCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAg                                         <  1:181711/150‑1 (MQ=255)                                                                                          cTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGAttttaag                                                                                    >  1:1370920/1‑102 (MQ=255)                                                                                          cTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTAAg                                                                                    <  2:1370920/105‑1 (MQ=255)                                                                                                    tGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggacaaggt                             <  2:321606‑M2/150‑118 (MQ=255)                                                                                                    tGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAg                             <  1:1408460/150‑1 (MQ=255)                                                                                                      cTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggac                                  >  1:630237‑M2/1‑31 (MQ=255)                                                                                                      cTCGGCCATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggac                                  <  2:630237‑M2/143‑113 (MQ=255)                                                                                                      cTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAggc                           <  1:1241549/150‑1 (MQ=255)                                                                                                       tCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAACGGt                                                                                                                     >  2:903961/1‑59 (MQ=255)                                                                                                       tCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGt                                                                                                                     <  1:903961/59‑1 (MQ=255)                                                                                                       tCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                     <  2:849218/91‑1 (MQ=255)                                                                                                       tCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCa                                                                                     >  1:849218/1‑91 (MQ=255)                                                                                                         ggCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTc                                                 <  1:1131873/125‑1 (MQ=255)                                                                                                         ggCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTc                                                 >  2:1131873/1‑125 (MQ=255)                                                                                                         ggCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAggccgg                        >  2:1292597/1‑150 (MQ=255)                                                                                                         ggCAATATAAGCCGGCAGCCGGGCGTGGCAAGCAAAAACCAGCTTAGTGGAAAAGGGTTTCCGCACCTGAACGCCATACTGGACTTTCAGGGTCTTGGGCATTTGCATCGCCGGGATTCCTTGTCACTGCGAGCACAATATTCAggccgc                        >  2:49537/1‑149 (MQ=255)                                                                                                            cATATAGGCCCGCAGCCGGGCGTGGcgagcaggacatcgaggcggcaatcttcacctcgtatcacaacgtcaactattacagcgatttcctttactgctcgttcggccgcccttatgcgctggtgatcacccaggacaaggtggtctcga                     >  1:321606‑M2/1‑25 (MQ=255)                                                                                                             atatAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                                                           >  2:390678/1‑111 (MQ=255)                                                                                                             atatAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCggg                                                           <  1:390678/111‑1 (MQ=255)                                                                                                                 aGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑TCCTga               <  1:153360/150‑1 (MQ=255)                                                                                                                 aGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑GCCTga               <  1:228136/150‑1 (MQ=255)                                                                                                                    cccGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGG‑CGGCCGGCCTgaaca            <  2:498968/150‑4 (MQ=255)                                                                                                                     ccGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTtgt                                            <  2:602371/118‑1 (MQ=255)                                                                                                                     ccGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTtgt                                            >  1:602371/1‑118 (MQ=255)                                                                                                                          gCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCATTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑GCCTGAGAAGCATTg      <  1:466858/150‑1 (MQ=255)                                                                                                                              ggCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑GCCTGAGAAGCATTGCAAc  <  1:1292597/150‑1 (MQ=255)                                                                                                                                    |                                                                                                                                                 GTGATCACCAGCGCATAAGGGCGGCCGAACGAGCAGTAAAGGAAATCGCTGTAATAGTTGACGTTGTGATACGAGGTGAAGATTGCCGCCTCGATGTCCTGCTCGGCCATATAGGCCCGCAGCCGGGCGTGGCGAGCAGCGTATTCCTGAGCGGAAAAGGTTGGCTGCACCTTGTCGCCATTGCGGATTTTCAGGGTCTTGGGCATTTGCATGGTCGGGGTTCCTTGTCGTTGTGAGCACGCTGTTCAGGCCGGCC‑GCCTGAGAAGCATTGCAAC  >  NC_002947/4167308‑4167582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.