New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5222954 =NA (NA)22 (0.440)
+GGTGAT		 13/234 NT 26.6% intergenic (‑317/+62) PP_4602/PP_4603 AraC family transcriptional regulator/transposase
?NC_002947 = 5454758 64 (1.220)intergenic (+40/+121) PP_4791/PP_4792 transposase/hypothetical protein

Only 100 of 107 total aligned reads displayed.

TTATGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGTAGAACACCCGATACCCCACCAAC  >  NC_002947/5454610‑5454906
                                                                                                                                                    |                                                                                                                                                    
ttATGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGa                                                                                                                                                     <  2:750538‑M2/150‑2 (MQ=255)
ttATGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGa                                                                                                                                                     <  1:330438‑M2/150‑2 (MQ=255)
ttATGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGGGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGc                                                                                                                                                     >  1:790607/1‑150 (MQ=11)
ttATGTTGAACAAGCCCTACCGAAGCCCGAAATGAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGa                                                                                                                                                     <  2:1086166‑M2/150‑2 (MQ=255)
  aTGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatc                                                                                                                                                   <  1:1272662‑M2/150‑4 (MQ=255)
   tGTTCAACAAGTTCTTGAGAAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCggg                                                                                                                                                  <  2:790607/150‑1 (MQ=12)
     ttGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacc                                                                                                                                                >  1:817357‑M2/1‑144 (MQ=255)
      tGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcaccc                                                                                                                                               >  1:750538‑M2/1‑143 (MQ=255)
       gAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcaccca                                                                                                                                              <  2:777395‑M2/150‑9 (MQ=255)
        aaCAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcac                                                                                                                                                 <  2:19989‑M2/146‑6 (MQ=255)
        aaCAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcac                                                                                                                                                 >  1:19989‑M2/1‑141 (MQ=255)
          cAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGGATCAAATGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGGTGCATTTTGTTTGATTAGAGatcaacccgcc                                                                                                                                           <  2:1062381‑M2/150‑12 (MQ=255)
             ggTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCCTTGCTTCGCCAAGCCCGGAAACTGGGGTATCAACCGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGGTTGATTTTGTTTGATGAGAGatcaccccgcccct                                                                                                                                        <  2:1402951‑M2/150‑15 (MQ=255)
                   gaggagTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggc                                                                                                                                  <  2:446933‑M2/150‑21 (MQ=255)
                      gagTTCGAAGCCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  1:698842‑M2/1‑127 (MQ=255)
                      gagTTCGAAGCCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  1:607201‑M2/1‑127 (MQ=255)
                      gagTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  1:446933‑M2/1‑127 (MQ=255)
                       agTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctggg                                                                                                                              >  1:873493‑M2/1‑126 (MQ=255)
                        gTTCGAAGCCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgggt                                                                                                                             >  2:109040‑M2/1‑125 (MQ=255)
                        gTTCGAAGCCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACGGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgggt                                                                                                                             >  1:1095720‑M2/1‑125 (MQ=255)
                         ttagAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGATTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTc                                                                                                                            >  1:1299065/4‑150 (MQ=255)
                         ttCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTc                                                                                                                            >  1:315093/1‑150 (MQ=255)
                            gAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTcgcg                                                                                                                         >  1:913086/1‑150 (MQ=255)
                                 cAGAAGTCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAAc                                                                                                                    >  2:507264/1‑150 (MQ=255)
                                       ccAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGaa                                                                                                              >  2:1344584/1‑150 (MQ=255)
                                       ccAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAACGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGaa                                                                                                              <  1:1360366/150‑1 (MQ=255)
                                        cAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAAc                                                                                                             >  1:1300931/1‑150 (MQ=255)
                                         aaGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               <  2:351282‑M2/131‑24 (MQ=255)
                                         aaGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  1:351282‑M2/1‑108 (MQ=255)
                                              cGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               <  2:617052‑M2/126‑24 (MQ=255)
                                              cGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  1:617052‑M2/1‑103 (MQ=255)
                                                gCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTg                                                                                                     <  2:1007295/150‑1 (MQ=255)
                                                  aGGTCCGGGCTTTGCTTCGCCAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGga                                                                                                   <  2:1300931/150‑1 (MQ=255)
                                                    gTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatca                                                                                                                                                  <  1:1232713‑M2/101‑5 (MQ=255)
                                                    gTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatca                                                                                                                                                  >  2:1232713‑M2/1‑97 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgggtga                                                                                                                           <  2:248954‑M2/121‑28 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgggtga                                                                                                                           >  1:248954‑M2/1‑94 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACg                                                                                                                   >  1:625963/1‑129 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACg                                                                                                                   <  2:625963/129‑1 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTg                                                                                              <  2:140701/150‑1 (MQ=255)
                                                       cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTg                                                                                              >  2:1332722/1‑150 (MQ=255)
                                                       cGGGCTTTGCGAAGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTg                                                                                              >  2:750906/1‑150 (MQ=255)
                                                        gggCTTTGCGAAGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTgg                                                                                             >  2:653633/1‑150 (MQ=255)
                                                         ggCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGc                                                                                            >  2:89249/1‑150 (MQ=255)
                                                         ggCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGc                                                                                            <  1:555944/150‑1 (MQ=255)
                                                         ggCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGCTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGc                                                                                            <  1:1151150/150‑1 (MQ=255)
                                                         ggCTTTGCGAAGCAAAGCCCGGAAACTGGGGTATCCACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGc                                                                                            >  1:690178/1‑150 (MQ=255)
                                                            tttGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCcag                                                                                         >  2:1050918/1‑150 (MQ=255)
                                                                 gaagCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAgcaggg                                                                                    >  1:399111/4‑150 (MQ=255)
                                                                      aaaGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGc                                                                               <  2:1130394/150‑1 (MQ=255)
                                                                       aaGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGATCGGCGGGTGGAGATTGGCCAGCAGGGCAGGcc                                                                              <  2:17567/150‑1 (MQ=255)
                                                                           ccGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               <  1:676878‑M2/97‑24 (MQ=255)
                                                                           ccGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAgcagggcagg                                                                                >  1:1078418/1‑144 (MQ=255)
                                                                           ccGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAgcagggcagg                                                                                <  2:1078418/144‑1 (MQ=255)
                                                                           ccGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCttt                                                                          <  1:507264/150‑1 (MQ=255)
                                                                           ccGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATCTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  2:676878‑M2/1‑74 (MQ=255)
                                                                            cGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               <  1:329000‑M2/96‑24 (MQ=255)
                                                                            cGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgg                                                                                                                               >  2:329000‑M2/1‑73 (MQ=255)
                                                                            cGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTc                                                                         >  2:628584/1‑150 (MQ=255)
                                                                              gAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTcgc                                                                       <  2:341718/150‑1 (MQ=255)
                                                                                aaCTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCgg                                                                     <  1:961523/150‑1 (MQ=255)
                                                                                aaCTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCgg                                                                     <  2:913086/150‑1 (MQ=255)
                                                                                aaCTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCgg                                                                     <  1:1344584/150‑1 (MQ=255)
                                                                                aaCTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCgg                                                                     <  1:653633/150‑1 (MQ=255)
                                                                                aaCTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCgg                                                                     <  1:750906/150‑1 (MQ=255)
                                                                                      ggTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGc                                                               <  1:1332722/150‑1 (MQ=255)
                                                                                       gTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGat                                                                                                                                                    <  1:1215423‑M2/64‑3 (MQ=255)
                                                                                       gTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGat                                                                                                                                                    >  2:1215423‑M2/1‑62 (MQ=255)
                                                                                       gTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGcc                                                              >  1:842224/1‑150 (MQ=255)
                                                                                        tATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCttt                                                                          <  1:1290277/137‑1 (MQ=255)
                                                                                        tATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCttt                                                                          >  2:1290277/1‑137 (MQ=255)
                                                                                          tCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTAc                                                                                                                                             >  2:1403013/1‑68 (MQ=35)
                                                                                          tCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTAc                                                                                                                                             <  1:1403013/68‑1 (MQ=35)
                                                                                               tggtggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcaccca                                                                                                                                              <  1:735238‑M2/62‑9 (MQ=255)
                                                                                               tggtggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcaccca                                                                                                                                              >  2:735238‑M2/1‑54 (MQ=255)
                                                                                               tggtggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTa                                                                                                                               >  1:704645/1‑77 (MQ=255)
                                                                                               tggtggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTa                                                                                                                               <  2:704645/77‑1 (MQ=255)
                                                                                                ggtggCCGCTTGAGTGATTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTAc                                                     <  2:1299065/150‑1 (MQ=255)
                                                                                                  tggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAg                                                   >  2:744851/1‑150 (MQ=255)
                                                                                                   ggCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAgg                                                  <  1:116217/150‑1 (MQ=255)
                                                                                                         ttGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTa                                            >  2:780341/1‑150 (MQ=255)
                                                                                                                cTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGc                                     <  1:1050918/150‑1 (MQ=255)
                                                                                                                 ttAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGatcacccagcccggaagggctgggt                                                                                                                             <  2:819926‑M2/61‑26 (MQ=255)
                                                                                                                 ttAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGgag                                                                                                  <  1:194016/88‑1 (MQ=255)
                                                                                                                 ttAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGgag                                                                                                  >  2:194016/1‑88 (MQ=255)
                                                                                                                 ttAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGAtt                                                                                               >  1:575858/1‑91 (MQ=255)
                                                                                                                 ttAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGAtt                                                                                               <  2:575858/91‑1 (MQ=255)
                                                                                                                      aaaCAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCAGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGcc                                    >  1:432685/1‑145 (MQ=255)
                                                                                                                      aaaCAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCAGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGcc                                    <  2:432685/145‑1 (MQ=255)
                                                                                                                         cAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTg                                >  1:913240/1‑146 (MQ=255)
                                                                                                                            tGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGt                         >  2:569466/1‑150 (MQ=255)
                                                                                                                             gggTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGTa                        <  2:842224/150‑1 (MQ=255)
                                                                                                                                ttGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGACAGGCCCTTTCGCgg                                                                     >  1:356210/1‑102 (MQ=255)
                                                                                                                                ttGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGACAGGCCCTTTCGCgg                                                                     <  2:356210/102‑1 (MQ=255)
                                                                                                                                          tttgATGAGAGatcacccagcccttccgggctgggtgatctctcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcc                              >  1:878955‑M2/1‑11 (MQ=255)
                                                                                                                                          tttgATGAGAGatcacccagcccttccgggctgggtgatctctcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcc                              <  2:878955‑M2/131‑121 (MQ=255)
                                                                                                                                          tttgATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAg                          >  1:845826/1‑135 (MQ=255)
                                                                                                                                          tttgATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAg                          <  2:845826/135‑1 (MQ=255)
                                                                                                                                               tgaGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGTAGAACACCCGATaccccac      <  2:1426327/150‑1 (MQ=255)
                                                                                                                                                   agCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGTAGAACACCCGATaccccaccaac  <  1:745248/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTATGTTGAACAAGGTCTTGAGGAGTTCGAAACCAGAAGCCAAGACCGGCAGGTCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTATCAACTGGTGGCCGCTTGAGTGCTTAGAAAACAATGGGTTGCATTTTGTTTGATGAGAGCGGGTTTACCCGCGAATACGGTAGTCGCGGCAACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCAGGCCCTTTCGCGGGCAAGCCCGGTCCTACAGGGGATTATGTAAGCCGGTGAATCAGTAGAACACCCGATACCCCACCAAC  >  NC_002947/5454610‑5454906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.