New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6055208	38 (0.720)	5 (0.100)	5/230	NT	11.8%	coding (105/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	= 6055248	39 (0.790)					coding (145/732 nt)	tonB	TonB energy transducing system subunit TonB

AAGAAATGATGAAAACGCGCTCTAACATGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATCCCCAAGCCGCCCAAGCCGA  >  NC_002947/6055099‑6055389                                                                                                                                                      |                                                                                                                                              aaGAAATGATGAAAACGCGCTCTAACATGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCCAAGGCGAGCGAGCTGCCCCCGGCAGCGATGATGGTCGAAc                                                                                                                                               >  2:691017/1‑150 (MQ=255)                 gcgcTCTAACATGGCGCGCTACGGTGGCAGCATCACGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGa                                                                                                                               >  1:630305/1‑150 (MQ=255)                     tctAACATGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCAACGTTGCCGGAGCCt                                                                                                                           >  1:999694/1‑150 (MQ=255)                        aaCATGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGAAGGTCGAACTGGCACCGTTGCCGGAGCCTgcg                                                                                                                        >  1:1265079/1‑150 (MQ=255)                            tGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGccac                                                                                                                    <  2:222803/150‑1 (MQ=255)                                        gTGGCAGCCTGGCGATCGTGCTGGATATGTACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCaa                                                                                                        <  1:279/150‑1 (MQ=255)                                                 tGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTc                                                                                               >  2:1424763/1‑150 (MQ=255)                                                         gTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCa                                                                                       >  2:974204/1‑150 (MQ=255)                                                            cTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCg                                                                                    >  1:566897/1‑150 (MQ=255)                                                             tGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCgg                                                                                   <  2:630305/150‑1 (MQ=255)                                                                gtgtGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGccc                                                                                <  2:1035329/150‑1 (MQ=255)                                                                gtgtGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGccc                                                                                <  1:974204/150‑1 (MQ=255)                                                                       cGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGa                                                                         <  1:691017/150‑1 (MQ=255)                                                                            tCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGAAGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAac                                                                    <  2:1265079/150‑1 (MQ=255)                                                                                  tgctgcTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGt                                                              >  2:483521/1‑150 (MQ=255)                                                                                    ctgctgACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACtggcaccgaccagttgagcgtcagcagcacggcgacaacgtgcacacccagcacgatcgccaggctgccaccgtagcgcgcca                                                            <  2:905843‑M2/150‑84 (MQ=255)                                                                                        tgACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGa                                                        >  1:199963/1‑150 (MQ=255)                                                                                        tgACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCAACACACCCAAAGACCGCCGCGCAGCCACCGACCCCTTGCGAGTAACCACCGTTGCCgc                                                        >  2:727076/1‑149 (MQ=255)                                                                                          aCGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAg                                                      >  1:63544/1‑150 (MQ=255)                                                                                             cTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGa                                                                      <  2:808713/131‑1 (MQ=255)                                                                                             cTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGa                                                                      >  1:808713/1‑131 (MQ=255)                                                                                             cTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTg                                                   <  1:1006843/150‑1 (MQ=255)                                                                                                aaCTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCaaa                                                                                                       >  2:1293808/1‑95 (MQ=255)                                                                                                aaCTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCaaa                                                                                                       <  1:1293808/95‑1 (MQ=255)                                                                                                aaCTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCa                                                <  1:925335/150‑1 (MQ=255)                                                                                                   tGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGaa                                             >  2:882867/1‑150 (MQ=255)                                                                                                        ggTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACtggcaccgaccagttgagcgtcagcagcacggcgaccacgt                                                                                                      >  2:1340436‑M2/1‑47 (MQ=255)                                                                                                        ggTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACtggcaccgaccagttgagcgtcagcagcacggcgaccacgt                                                                                                      <  1:1340436‑M2/88‑42 (MQ=255)                                                                                                        ggTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCgcc                                        <  1:726027/150‑1 (MQ=255)                                                                                                             cacaGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCgcccaagc                                   >  2:758688/1‑150 (MQ=255)                                                                                                                   ccATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGa                             <  2:199963/150‑1 (MQ=255)                                                                                                                     aTCGAGCTGCCCCCGGCAGCTATGATAGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGTTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATc                           <  2:293649/150‑1 (MQ=255)                                                                                                                     aTCGAGCTGCCCCCGGCAGCGATGATGGTCGAACtggcaccgaccagttgagcgtcagcagcacggcgaccacgtgcacacccagcacgatcgccaggctgccaccgtagcgcgccatgttagagcgcgttttcatcatttcttggctgc                           <  2:881645‑M2/150‑117 (MQ=255)                                                                                                                      tCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCg                          >  2:980184/1‑150 (MQ=255)                                                                                                                       cGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGc                         <  1:882867/150‑1 (MQ=255)                                                                                                                          gCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCAt                      >  1:1388346/1‑150 (MQ=255)                                                                                                                            tGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATcc                    >  1:66052/1‑150 (MQ=255)                                                                                                                              ccgggggCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATcccc                  <  1:467976/145‑1 (MQ=255)                                                                                                                                 ccGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCCCCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCCAGCCCAAGATCGCCCTCcccaac               >  2:143740/1‑149 (MQ=255)                                                                                                                                  cGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATCcccaagc              <  1:727076/150‑1 (MQ=255)                                                                                                                                    gCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATCcccaagccg            >  2:1351170/1‑150 (MQ=255)                                                                                                                                           tgatgGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATCcccaagccgcccaagc     >  1:902946/1‑150 (MQ=255)                                                                                                                                              tgGTCGAACtggcaccgaccagttgagcgtcagcagcacggcgaccacgtgcacacccagcacgatcgccaggctgccaccgtagcgcgccatgttagagcgcgttttcatcatttcttggctgccgtctcgagacctaccagaccgact  >  1:881645‑M2/1‑9 (MQ=255)                                                                                                                                                 tCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGa                                                                         <  2:1361932/76‑1 (MQ=255)                                                                                                                                                 tCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGa                                                                         >  1:1361932/1‑76 (MQ=255)                                                                                                                                                   gAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCa                                                                                           <  2:550450/56‑1 (MQ=255)                                                                                                                                                   gAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCa                                                                                           >  1:550450/1‑56 (MQ=255)                                                                                                                                                      |                                                                                                                                              AAGAAATGATGAAAACGCGCTCTAACATGGCGCGCTACGGTGGCAGCCTGGCGATCGTGCTGGGTGTGCACGTGGTCGCCGTGCTGCTGACGCTCAACTGGTCGGTGCCACAGGCCATCGAGCTGCCCCCGGCAGCGATGATGGTCGAACTGGCACCGTTGCCGGAGCCTGCGCCACCACCACCCCCAAAGGCAGCTCCGCAGCCACCGGCCCCGGTCGAGGAACCACCGTTGCCGAAGCTGGCAGAAGCGCCCAAGCCCAAGATCGCCATCCCCAAGCCGCCCAAGCCGA  >  NC_002947/6055099‑6055389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.