| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,424,935 | T→A | 5.5% | intergenic (+480/‑32) | PP_3039 → / → PP_3040 | hypothetical protein/holin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,424,935 | 0 | T | A | 5.5% | 221.4 / 2.8 | 76 | intergenic (+480/‑32) | PP_3039/PP_3040 | hypothetical protein/holin |
| Reads supporting (aligned to +/- strand): ref base T (31/37); new base A (2/2); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 | |||||||||||
ATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTA > NC_002947/3424796‑3425078 | aTTCCCCGGAACTTTGCCACTGCTTGCCGGGTGGCATTAAAATTAGCTGTTTGCTGCCGGAAACAACCAATAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑GCCAGGGCCgggg < 2:448424/150‑1 (MQ=255) ttCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGG‑GCCGGGGt < 2:1145283/150‑1 (MQ=255) ggACGTTTACCACTTATTGCCGGGTGGCATTAAAAATGGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGACCGCGAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGc > 2:581420/1‑150 (MQ=255) tACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTggg < 2:722401/150‑1 (MQ=255) cgcTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGG‑GCCGGGGttttca > 1:630552/3‑137 (MQ=255) cACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGG‑GCCGGGGttttca < 2:630552/139‑3 (MQ=255) aTTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGa < 1:103056/150‑1 (MQ=255) ccGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATCaa < 1:1426340/150‑1 (MQ=255) gggTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGTGGGATTCGATGAACa > 1:294547/1‑150 (MQ=255) cATTAAAACTCGCTTGCTGCCACCGGAATCGACCCGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagc > 1:963427/1‑150 (MQ=255) ttAAAGCTCGCTTGCCTCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagcag < 1:764521/150‑1 (MQ=255) aaaCTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCaa > 2:1395088/1‑150 (MQ=255) aaCTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAATTCGTCGAAGCTCAGGG‑TTTGGGTTCGGGGGTGTTGCCTTTGGGGGATTCGATGAACAGCGAACAGCAAg > 1:1236502/1‑150 (MQ=255) aaCTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCCCCAAAGGC‑AAAAACCCCGGC‑GCCAGGGCCGGGGttttca < 1:539422/115‑3 (MQ=21) aaCTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCCCCAAAGGC‑AAAAACCCCGGC‑GCCAGGGCCGGGGttttca > 2:539422/1‑113 (MQ=21) tgctgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGtt < 2:1308530/150‑1 (MQ=255) ctcccACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTga < 2:1234664/147‑1 (MQ=255) tgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGtt < 1:1410884/147‑1 (MQ=255) tgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGtt > 2:1410884/1‑147 (MQ=255) gcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTgaga < 1:257349/150‑1 (MQ=255) ccACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt > 2:1389015/1‑150 (MQ=255) ccACCGGAATCCACCTGCAAAAAGTACCCATCTTCGAGACGTGCCGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCACCGGGGTTTTTGCCTTTGGTGGATTCGATGAACAGCCAGCAGCAAGCGTTAGTTGAGAt < 1:581420/150‑1 (MQ=255) cACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATg > 2:150241/1‑150 (MQ=255) aCCGTAATCCACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGTCCTCTAAACACTGAAATCCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGTATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGc < 2:86416/150‑1 (MQ=255) aCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTg < 1:305000/107‑1 (MQ=255) aCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTg > 2:305000/1‑107 (MQ=255) gACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCAGAACACCACTGAAAACCCCGGC‑GCGGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggt > 1:885349/1‑150 (MQ=255) aCCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTggg < 1:828211/99‑1 (MQ=255) aCCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTggg > 2:828211/1‑99 (MQ=255) aCCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggtt > 1:574068/1‑150 (MQ=255) aCCCGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggtt < 2:963427/150‑1 (MQ=255) ccTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGa < 2:661400/106‑1 (MQ=255) ccTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGa > 1:661400/1‑106 (MQ=255) ttGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTNGATGAANAGCGAGCAGCAANCGTTAGTTGAGATGCCAATCtggttgg < 1:1343811/149‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGc < 2:3975/113‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGc > 1:3975/1‑113 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg < 2:574068/150‑1 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTc > 1:572042/1‑102 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTc < 2:572042/102‑1 (MQ=255) gTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggta > 2:1343811/1‑149 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGa > 1:326706/1‑150 (MQ=255) aGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCCTc < 2:318421/150‑1 (MQ=255) ccATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCggg < 1:854179/69‑1 (MQ=255) ccATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCggg > 2:854179/1‑69 (MQ=255) ccATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTc > 1:1196370/1‑150 (MQ=255) cTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGttttt < 1:404346/71‑1 (MQ=255) cTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGttttt > 2:404346/1‑71 (MQ=255) ttCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTgg > 1:561475/1‑150 (MQ=255) agaCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt < 1:18223/129‑1 (MQ=255) agaCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt > 2:18223/1‑129 (MQ=255) aCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGa < 2:191585/91‑1 (MQ=255) aCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGa > 1:191585/1‑91 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt > 2:344229/1‑80 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 1:344229/80‑1 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg > 2:928495/1‑150 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg < 1:661671/150‑1 (MQ=255) tGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCgggg < 2:1236502/150‑1 (MQ=255) ggCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTc < 1:1395088/150‑1 (MQ=255) gcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAgg > 1:860489/1‑150 (MQ=255) gCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTgg < 2:979273/150‑1 (MQ=255) gCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTgg < 1:150241/150‑1 (MQ=255) cAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGcc < 2:885349/150‑1 (MQ=255) aaaCACTGAAAACCCCGGC‑CCTGGCGCCGGGGCCTCTGACTTTGGGGGCTTCCACTAACATGGTTCAGCAAGTGTGAGTTGAGATGCCAATCTGGTGGGTTATCTTCTTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCg > 1:739060/1‑150 (MQ=255) cTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGATATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGATTTGTTGCGTGCCGACATg < 2:294547/150‑1 (MQ=255) tGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg > 1:389698/1‑119 (MQ=255) tGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg < 2:389698/119‑1 (MQ=255) aaaaaCCCCGGCGCCAGG‑GCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGc > 2:933151/2‑150 (MQ=255) aaaaCCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATgg > 2:917251/1‑148 (MQ=255) aaaaCCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATgg < 1:917251/148‑1 (MQ=255) aaaCCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCg > 1:123460/1‑150 (MQ=255) ccccGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCg < 1:1389015/150‑1 (MQ=255) cccGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt < 2:88096/72‑1 (MQ=255) cccGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt > 1:88096/1‑72 (MQ=255) cGGC‑CCTGGCGCCGGGGTTTTGGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTGCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTa < 2:629236/150‑1 (MQ=255) c‑ccTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTgg < 2:664929/99‑1 (MQ=255) c‑ccTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTgg > 1:664929/1‑99 (MQ=255) | ATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGC‑CCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTA > NC_002947/3424796‑3425078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |