| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,480,757 | A→T | 5.3% | W169R (TGG→AGG) | PP_3090 ← | OmpA domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,480,757 | 0 | A | T | 5.3% | 239.0 / 4.1 | 75 | W169R (TGG→AGG) | PP_3090 | OmpA domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (37/34); new base T (2/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.15e-01 | |||||||||||
GCTGACGCTGACGATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACCAGGGCAGGGCATACAGGGC > NC_002947/3480608‑3480904 | gctgacgctgacGATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCa > 2:124673/1‑150 (MQ=255) tgacgctgacgATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTACTTGGGGGCGCTGAAGGAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑Gt > 1:525902/1‑150 (MQ=255) caacgctgacgATCAGGCCGTTAAGGGGACGGCGTGGGCGGTGCGGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCAGGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑Gt < 1:689367/148‑1 (MQ=255) gacgctgacgATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTc > 2:1063826/1‑150 (MQ=255) gctgacgATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCa > 1:1318529/1‑150 (MQ=255) ctgacgATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAg < 2:1205030/150‑1 (MQ=255) gacgATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGtt < 2:1163076/150‑1 (MQ=255) gATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTg‑cg > 1:961760/1‑150 (MQ=255) aGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAgg > 1:689118/1‑150 (MQ=255) ggggACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGc > 2:566782/1‑150 (MQ=255) gggACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGcc > 1:54674/1‑150 (MQ=255) ggccGGCGCTGGCTGTGCTGGCGCAGCAGTTGCAAAAACCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGccc < 1:152549/147‑1 (MQ=255) cTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCg < 2:961760/150‑1 (MQ=255) cTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCg > 2:1160827/1‑150 (MQ=255) tGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCT‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGc > 1:845116/1‑150 (MQ=255) tGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCT‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGc > 1:845513/1‑150 (MQ=255) cTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTc < 1:1020490/150‑1 (MQ=255) agcagTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCg < 2:525902/150‑1 (MQ=255) ttGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATa > 1:243541/1‑150 (MQ=255) tGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAg < 2:1076823/150‑1 (MQ=255) aaaaGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCcg < 2:681902/117‑1 (MQ=255) aaaaGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCcg > 1:681902/1‑117 (MQ=255) aaaaGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAggggg > 2:679164/1‑149 (MQ=255) aaaGCCGCGCCACTTGCCGGCTTCCGCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGaa < 2:54674/150‑1 (MQ=255) cgcCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAgg < 1:1160827/150‑1 (MQ=255) ccACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCCGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGcc > 2:130113/1‑150 (MQ=255) aCTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCg > 1:917375/1‑150 (MQ=255) ttGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCg > 1:734793/1‑126 (MQ=255) ttGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCg > 1:735050/1‑126 (MQ=255) ttGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCg < 2:734793/126‑1 (MQ=255) ttGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCg < 2:735050/126‑1 (MQ=255) ttGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGAc > 1:1235192/1‑150 (MQ=255) ctGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAg > 2:1411962/2‑138 (MQ=255) ctGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAg < 1:1411962/137‑1 (MQ=255) cGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTGG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCa < 2:451388/150‑1 (MQ=255) ccTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCCATTC‑GTGATG‑TGTTCCACGGAACGGCCGTCACCTGCCGCCCATGCACGAGACCCGCCCGCCTTCGCGCTCTGCATAGGGGAAGTTCAGGCCCGACTGCAGt < 1:679164/149‑1 (MQ=255) ttCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTat > 1:960380/1‑150 (MQ=255) tCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTatc < 1:566782/150‑1 (MQ=255) ccTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTatca < 2:689118/150‑1 (MQ=255) cTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTatcat < 2:1318529/150‑1 (MQ=255) tCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCGGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGTGGAAGTTCAGGCCCGACTGCAGTatcatc < 1:235428/150‑1 (MQ=255) tCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCcgc < 2:646376/92‑1 (MQ=255) tCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCcgc > 1:646376/1‑92 (MQ=255) tCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCAc > 1:806270/1‑101 (MQ=255) tCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCAc < 2:806270/101‑1 (MQ=255) gtggCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAACTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCACACGCCTTCGCGCCCGGCAAAGGGGAAGACCAGTCACGACTGCAGTATCATCGt > 2:726045/3‑150 (MQ=255) tGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTatcatc < 1:717658/143‑1 (MQ=255) tGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTatcatc > 2:717658/1‑143 (MQ=255) ttCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTg‑cgc < 1:828157/66‑1 (MQ=255) ttCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTg‑cgc > 2:828157/1‑66 (MQ=255) ttCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTg > 2:657425/1‑150 (MQ=255) tGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTc < 2:874565/94‑1 (MQ=255) tGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTc > 1:874565/1‑94 (MQ=255) cGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAg > 1:1266675/1‑109 (MQ=255) cGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAg < 2:1266675/109‑1 (MQ=255) cGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTTCATTATTATCTTGCTCTTGCCGTCGGCAGGCt < 2:1361021/150‑1 (MQ=255) ggCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAgg > 2:771234/1‑64 (MQ=255) ggCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAgg < 1:771234/64‑1 (MQ=255) gCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTgg < 2:243541/150‑1 (MQ=255) ccAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGa < 1:130113/150‑1 (MQ=255) cagcagTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGAc < 1:1063826/150‑1 (MQ=255) gcagTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGc < 2:913455/126‑1 (MQ=255) gcagTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGc > 1:913455/1‑126 (MQ=255) cagTACCGCTTCAGAGCTGAAGAACCT‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAg < 2:845116/150‑1 (MQ=255) cagTACCGCTTCAGAGCTGAAGAACCT‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAg < 2:845513/150‑1 (MQ=255) ccGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATACGGGGAGGTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTAcc > 1:449256/1‑150 (MQ=255) agagCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAg > 1:1353663/1‑73 (MQ=255) agagCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAg < 2:1353663/73‑1 (MQ=255) agCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACcagggcaggg > 1:1271805/1‑150 (MQ=255) cTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACCAgggcagggca > 2:1004968/1‑150 (MQ=255) gaagaaCCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACCAGGGCAGGGCATa > 1:241131/1‑150 (MQ=255) aagaaCCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCa > 1:445481/1‑88 (MQ=255) aagaaCCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCa < 2:445481/88‑1 (MQ=255) aCCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACCAGGGCAGGGCATACAggg > 1:614143/1‑150 (MQ=255) ccA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCCCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCCGCGGTAGGCTGGCCAATGACCAGGTACCAGGGCAGGGCATACAGGGc > 1:536850/1‑150 (MQ=255) ccA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCACGGGCAGCGACTGCGCTAGCGCCACTGAGATGGGAAGTGCACGCGCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTTGCCAAGTGCCAGGTACCAGGGCAGGGCATACAggga > 1:248411/1‑149 (MQ=255) | GCTGACGCTGACGATCAAGCCGTTAAGGGGACGGCGCTGGCGGTGCTGGCGCAGCAGTTGCAAAAAGCCGCGCCACTTGCCGGCTTCCTCGGGGCTGTTCATGTAACGCCCGGCAGTGTCCAGCAGTACCGCTTCAGAGCTGAAGAACCA‑GTCGCAGTTG‑CGCGTGCCGCCCAGGCCCGCGACCCGCACGCCTTCGCGCTCGGCATAGGGGAAGTTCAGGCCCGACTGCAGTATCATCGTGCTCTTGCCGGCGGCAGGCTGGCCAATGACCAGGTACCAGGGCAGGGCATACAGGGC > NC_002947/3480608‑3480904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |