| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,593,940 | G→C | 7.6% | R311R (CGG→CGC) | PP_3171 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,593,940 | 0 | G | C | 7.6% | 242.9 / 8.5 | 79 | R311R (CGG→CGC) | PP_3171 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (33/40); new base C (3/3); total (36/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
CACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGT > NC_002947/3593794‑3594086 | cACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAg > 2:523139/1‑150 (MQ=255) gcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGCCCCGGGGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACAt < 1:87742/150‑1 (MQ=255) gcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACAt < 2:870827/150‑1 (MQ=255) gcCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACAt > 2:924222/1‑150 (MQ=255) cGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGc < 2:1178679/150‑1 (MQ=255) gATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGcc < 1:577834/150‑1 (MQ=255) tCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCcgc > 2:298275/1‑150 (MQ=255) gTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAg > 2:89658/1‑150 (MQ=255) tGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGAAGCGGTCACAGGCCTATGCCGCTCAGgcgc > 2:1017033/1‑150 (MQ=255) ggCCTGCTCCGTAGCCGGAGGGCCAGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgct < 2:233512/150‑1 (MQ=255) gCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGAACGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgctg < 1:990237/150‑1 (MQ=255) ccTGCTCCGTAGCCGGGGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgctgg > 1:409363/1‑150 (MQ=255) tGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgctggct > 2:924620/1‑150 (MQ=255) tCCGTAGCCGGAGTGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGaa < 1:291460/150‑1 (MQ=255) tCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGaa > 2:1421809/1‑150 (MQ=255) gTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTg < 2:50056/150‑1 (MQ=255) tAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACTCGCGGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTgg < 2:1058675/150‑1 (MQ=255) gCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGc < 1:1024508/150‑1 (MQ=255) gCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCGGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGc < 1:612190/150‑1 (MQ=255) ccGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCt < 1:131923/150‑1 (MQ=255) ccGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGCCGCGCCAGCgg < 1:1042558/110‑1 (MQ=255) ccGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGCCGCGCCAGCgg > 2:1042558/1‑110 (MQ=255) cGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTg > 1:1420394/1‑150 (MQ=255) gAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGac < 2:105482/150‑1 (MQ=255) aGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGaca < 2:1063658/150‑1 (MQ=255) ccGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATc < 1:1146295/150‑1 (MQ=255) ccGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATc > 2:693399/1‑150 (MQ=255) ccGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATc > 1:445449/1‑150 (MQ=255) ccGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGCCGCGCCAGCgg > 1:151136/1‑101 (MQ=255) ccGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGCCGCGCCAGCgg < 2:151136/101‑1 (MQ=255) gAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATGGa < 1:1421809/150‑1 (MQ=255) gAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGa < 2:1005773/150‑1 (MQ=255) gTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGAGACGGTCGAGTaggg > 2:865138/1‑149 (MQ=255) gTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTagga > 2:1390754/1‑150 (MQ=255) gAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTaggagg < 1:391891/150‑1 (MQ=255) aGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGc < 2:302157/150‑1 (MQ=255) ggAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGa < 1:947262/135‑1 (MQ=255) ggAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGa > 2:947262/1‑135 (MQ=255) ggAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCgg > 1:575846/1‑150 (MQ=255) ggAAGGGCTGCGCTCGCTGATCGAGCAAACCGGGGCGGAACAGCGGCTGATAGAGTGCCGCATCCATGCCCCGCTGGCACGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCgg > 1:574852/1‑150 (MQ=255) gAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGa < 1:1279342/150‑1 (MQ=255) gCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTcac < 1:924620/150‑1 (MQ=255) tGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGa < 2:1136853/131‑1 (MQ=255) tGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGa > 1:1136853/1‑131 (MQ=255) gctGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgctggct > 2:983563/1‑103 (MQ=255) gctGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCgctggct < 1:983563/103‑1 (MQ=255) gctGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTc > 1:483543/1‑139 (MQ=255) gctGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTc < 2:483543/139‑1 (MQ=255) ggCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGc > 2:563157/1‑150 (MQ=255) gAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAg > 1:1215124/1‑100 (MQ=255) gAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAg < 2:1215124/100‑1 (MQ=255) gAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTcaca > 1:1364187/1‑117 (MQ=255) gAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTcaca < 2:1364187/117‑1 (MQ=255) aGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGCCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGtt < 1:89658/150‑1 (MQ=255) tgatgaTCGACTGCCACATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATGCGCACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCg > 1:727688/1‑150 (MQ=255) tgatCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTac > 2:597701/1‑150 (MQ=255) gatCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGc < 1:957228/100‑1 (MQ=255) gatCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGc > 2:957228/1‑100 (MQ=255) atCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACAt > 2:489928/1‑45 (MQ=255) atCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACAt < 1:489928/45‑1 (MQ=255) cTGCCGCCTCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATc > 2:420499/1‑83 (MQ=255) cTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATc < 1:420499/83‑1 (MQ=255) ccATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTa > 2:1343889/1‑150 (MQ=255) cATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTAc > 1:1248930/1‑150 (MQ=255) aTGCCCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGt < 1:1387339/76‑1 (MQ=255) aTGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGt > 2:1387339/1‑76 (MQ=255) gaccGCTGCCGCGCCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTc > 1:946187/3‑86 (MQ=255) gaccGCTGCCGCGCCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTc < 2:946187/84‑1 (MQ=255) aCCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCgg < 1:523139/150‑1 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGa > 1:323313/1‑69 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGa < 2:323313/69‑1 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTcac < 2:792021/103‑1 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTcac > 1:792021/1‑103 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTa < 2:1099762/126‑1 (MQ=255) ccGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTa > 1:1099762/1‑126 (MQ=255) ggCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGcc < 1:597701/150‑1 (MQ=255) gcgcGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCg < 1:924222/150‑1 (MQ=255) gcgcGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCg < 1:1343889/150‑1 (MQ=255) gcgGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGt < 1:693399/150‑1 (MQ=255) | CACGAGCGCGCCGTGCTCGATCAGGTGATGGCCTGCTCCGTAGCCGGAGGGCCCGAACGGGTGAGGGAAGGGCTGCGCTCGCTGATCGAGCAGACCGGGGCGGACGAGCTGATGATCGACTGCCGCATCCATGACCCGCTGGCGCGGCAGCGGTCACATGCCTATGCCGCGCAGGCGCTGGCTGAACTGGGCTGACACGATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGT > NC_002947/3593794‑3594086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |