| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,711,678 | A→T | 5.6% | V19D (GTC→GAC) | paaC ← | ring 1,2‑phenylacetyl‑CoA epoxidase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,711,678 | 0 | A | T | 5.6% | 221.9 / 4.0 | 71 | V19D (GTC→GAC) | paaC | ring 1,2‑phenylacetyl‑CoA epoxidase subunit beta |
| Reads supporting (aligned to +/- strand): ref base A (30/37); new base T (2/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01 | |||||||||||
CGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAGGGGGCGAACAGCGGG > NC_002947/3711529‑3711823 | cggcatcTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGCTGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGa < 2:500163/150‑1 (MQ=255) ggcatcTCGGCCACCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGAc < 2:812121/150‑1 (MQ=255) tctcGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAgg < 1:696074/150‑1 (MQ=255) tcGGCCATCGTCGAGCAGCTCGGCGGCATCCTCCAGCCAGTTGCGGGCATGTCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGCCCAGGGCGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGgc < 1:969422/150‑1 (MQ=255) cgtcgAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGc < 1:829794/150‑1 (MQ=255) cgAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCgc < 2:978075/150‑2 (MQ=255) cTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAAcag > 2:147372/1‑150 (MQ=255) tCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAAcagc > 2:189552/1‑150 (MQ=255) tCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAAcagc < 1:594866/150‑1 (MQ=255) aTACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAggg < 1:370617/150‑1 (MQ=255) cagccagTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCGACAGCGCCCTGGTCCAGGgcca < 2:1003412/121‑3 (MQ=255) cagccagTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCGACAGCGCCCTGGTCCAGGgcca > 1:1003412/1‑119 (MQ=255) gccagTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAggg < 1:854247/150‑1 (MQ=255) cGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTa < 1:189552/150‑1 (MQ=255) cGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTa < 1:147372/150‑1 (MQ=255) gggCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAgggg < 1:758805/134‑1 (MQ=255) gggCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAgggg > 2:758805/1‑134 (MQ=255) gggCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTAt < 1:977818/150‑1 (MQ=255) gCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAggg < 2:547973/131‑1 (MQ=255) gCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAggg > 1:547973/1‑131 (MQ=255) gCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGc > 1:1176050/1‑150 (MQ=255) ccTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCa > 2:1391082/1‑150 (MQ=255) cTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGa < 2:611669/113‑1 (MQ=255) cTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGa > 1:611669/1‑113 (MQ=255) tGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTAt > 1:913150/1‑145 (MQ=255) tGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTAt < 2:913150/145‑1 (MQ=255) tGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGATCTTCCTCGATGCCCGGGGCATGGCCACGCCATTCGCCGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATg < 1:674889/150‑1 (MQ=255) ccAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCAcc > 2:253886/1‑150 (MQ=255) aGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTc > 1:1374782/1‑150 (MQ=255) tCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTcaca < 1:253886/150‑1 (MQ=255) cGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACAt < 2:461822/150‑1 (MQ=255) cGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACAt < 1:968161/150‑1 (MQ=255) cGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTcc > 1:1375316/1‑150 (MQ=255) gACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGAGTCCg > 1:442548/1‑150 (MQ=255) gTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGa < 2:1011243/89‑1 (MQ=255) gTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGa > 1:1011243/1‑89 (MQ=255) tcaGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTtcgtc > 1:816192/1‑150 (MQ=255) tcaGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTtcgtc > 2:1297552/1‑150 (MQ=255) aGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCGCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCgg > 2:376503/1‑150 (MQ=255) ccAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGc < 1:671585/118‑1 (MQ=255) ccAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGc > 2:671585/1‑118 (MQ=255) ccAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAg > 2:792937/1‑150 (MQ=255) ttCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTc > 1:11412/1‑66 (MQ=255) ttCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTc < 2:11412/66‑1 (MQ=255) gATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTa < 1:1050550/97‑1 (MQ=255) gATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTa > 2:1050550/1‑97 (MQ=255) aTGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTgg < 1:399746/150‑1 (MQ=255) tGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTg < 1:1255555/148‑1 (MQ=255) tGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTg > 2:1255555/1‑148 (MQ=255) cGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATgg < 1:545568/150‑1 (MQ=255) aCGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGc < 2:705966/126‑1 (MQ=255) aCGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGc > 1:705966/1‑126 (MQ=255) ggCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTc < 2:195442/126‑1 (MQ=255) ggCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTc > 1:195442/1‑126 (MQ=255) cacCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCCGCTCGTAGAAGCTGGCATGGCGATAGACCTTgt > 1:1217961/1‑150 (MQ=255) acCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTgtc > 2:619961/1‑150 (MQ=255) acCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTgtc < 1:1300794/150‑1 (MQ=255) acCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTgtc > 1:564359/1‑150 (MQ=255) cATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTgtcgt < 2:336767/150‑1 (MQ=255) ttCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTcc < 2:1176050/150‑1 (MQ=255) gCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAg < 2:564359/150‑1 (MQ=255) gCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAg < 2:1375316/150‑1 (MQ=255) gCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGGAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAg > 1:463361/1‑150 (MQ=255) agagGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAggg < 1:1131911/150‑1 (MQ=255) agGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAggggg < 1:792937/150‑1 (MQ=255) tcg‑cTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAGGGGGCg > 2:176244/2‑150 (MQ=255) cgCCCTGGTCCAGGGCGCTGTCGCCGAGCAACAGCAGGTAggg < 2:1390270/42‑1 (MQ=37) cgCCCTGGTCCAGGGCGCTGTCGCCGAGCAACAGCAGGTAggg > 1:1390270/2‑43 (MQ=255) ccTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCGCCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAGGGGGCGACCAGCgg > 1:296213/1‑150 (MQ=255) cTGGACCAGGGCGCTGTCGCCGAGCAACAGTAGGTAGGGGATAAGGGCTTCTTTATGCAt < 1:685582/60‑1 (MQ=255) cTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCAt > 2:685582/1‑60 (MQ=255) cTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAGGGGGCGAACAGCggg < 1:1297552/150‑1 (MQ=255) | CGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCTCTTCCTCGATGGCCGGGGCACGGCCACACCATTCGCAGAGGCG‑CTG‑GCCCTGGACCAGGGCGCTGTCGCCGAGCAACAGCAGGTAGGGGATAAGGGCTTCTTTATGCATGGCCCACCTCACATGTGTCCGACTTCGTCGGGCAGCTCGTAGAAGCTGGCATGGCGATAGACCTTGTCGTCCGAGGGGGCGAACAGCGGG > NC_002947/3711529‑3711823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |