| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,763,547 | G→C | 8.2% | intergenic (+24/+1651) | PP_3326 → / ← PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,763,547 | 0 | G | C | 8.2% | 227.7 / 9.9 | 73 | intergenic (+24/+1651) | PP_3326/PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| Reads supporting (aligned to +/- strand): ref base G (30/37); new base C (3/3); total (33/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
GTACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCAT > NC_002947/3763398‑3763694 | gTACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATg > 1:870957/1‑150 (MQ=255) tACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGa > 2:339932/1‑150 (MQ=255) gCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACgg > 1:209903/1‑150 (MQ=255) tGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa < 2:704534/150‑1 (MQ=255) gAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAg < 1:360007/150‑1 (MQ=255) cTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATgg < 1:256942/150‑1 (MQ=255) tCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGc > 1:503807/1‑150 (MQ=255) aaCATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAg > 2:735886/1‑150 (MQ=255) aCATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGt < 1:849569/150‑1 (MQ=255) aCATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGt < 2:1168651/150‑1 (MQ=255) tcatcGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTgg > 2:199562/1‑150 (MQ=255) catcGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGa < 1:1363628/150‑1 (MQ=255) catcGCGGCCAAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGa < 2:456797/150‑1 (MQ=255) atcGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAg > 2:1000513/1‑150 (MQ=255) ggCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGtt < 2:1393178/150‑1 (MQ=255) gCCCAGGCTACCCTGCCAATGGCAGCCGGCCGACATGTGGCTCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTc < 2:1302234/150‑1 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa < 2:1116728/127‑1 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa > 1:1116728/1‑127 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAg > 1:484414/1‑143 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAg < 2:484414/143‑1 (MQ=255) aGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGaa < 1:199562/150‑1 (MQ=255) cTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGAACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGa < 1:98952/150‑1 (MQ=255) tACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAg > 2:834369/1‑150 (MQ=255) ccTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCa < 1:515631/126‑1 (MQ=255) ccTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCa > 2:515631/1‑126 (MQ=255) cTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGcc > 1:588207/1‑150 (MQ=255) ccAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGc > 2:431422/1‑150 (MQ=255) aaTGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa > 1:184062/1‑111 (MQ=255) aaTGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa < 2:184062/111‑1 (MQ=255) ccAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCt < 1:557109/122‑1 (MQ=255) ccAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCt > 2:557109/1‑122 (MQ=255) ccAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTg > 2:1395872/1‑150 (MQ=255) cagcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTgg < 1:339932/150‑1 (MQ=255) agcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGCCATACCTCGGCCGTCATGGCCGAg > 2:45316/1‑86 (MQ=37) agcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGCCATACCTCGGCCGTCATGGCCGAg > 2:45184/1‑86 (MQ=37) agcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGCCATACCTCGGCCGTCATGGCCGAg < 1:45316/86‑1 (MQ=37) agcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGCCATACCTCGGCCGTCATGGCCGAg < 1:45184/86‑1 (MQ=38) gcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAg > 1:1305172/1‑85 (MQ=38) gcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAg < 2:1305172/85‑1 (MQ=38) ccTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGcc < 2:772320/150‑1 (MQ=255) cTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGccc < 1:735886/150‑1 (MQ=255) agttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGc > 1:1067489/1‑150 (MQ=255) gttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCg < 1:1000513/150‑1 (MQ=255) ttcaCTGTCGTTCCTGGGTAAGCCGCACAACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGCCACAAGCCCGGCTGCgg < 2:475581/150‑1 (MQ=255) tGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGt < 1:179546/95‑1 (MQ=255) tGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGt > 2:179546/1‑95 (MQ=255) gTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGACTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGc > 2:1112944/1‑150 (MQ=255) cTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTGGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACgg > 1:1357704/1‑145 (MQ=255) cTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGGGTTCGGAATGAGTGCCTGCAACCa > 2:809100/1‑98 (MQ=255) cTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCGCGGCTGCGGCCACACGGCAATc > 1:1009707/1‑150 (MQ=255) cTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACgg < 2:1357704/145‑1 (MQ=255) cTGGGTAAGCCGCACCACGAGTAAACCAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGGGTTCGGAATGAGTGCCTGCAACCa < 1:809100/98‑1 (MQ=255) ggTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGaa < 2:1067489/150‑1 (MQ=255) tAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGCGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAaca > 2:165504/1‑150 (MQ=255) tAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAaca < 1:1276358/150‑1 (MQ=255) ccGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGAt > 1:1336338/1‑150 (MQ=255) cGCACGACGAGTAAAGTGAGCGACATACCTCGGCAATGACGGCCGAGGTATGGCAGTTTGAGGCGTTCGGAATGAGTGCCCGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCCCACACGATg < 2:492365/150‑1 (MQ=255) gCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATCGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGAATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATgg < 2:209903/150‑1 (MQ=255) ccacGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCa < 1:431422/150‑1 (MQ=255) cacGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCAt > 2:737532/1‑150 (MQ=255) cGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGt < 1:834369/150‑1 (MQ=255) gAGTAAAATAAAAGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTc > 2:770199/1‑150 (MQ=255) aGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCAt > 2:250023/1‑146 (MQ=255) aGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCAt < 1:250023/146‑1 (MQ=255) aGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCg > 2:1418478/1‑150 (MQ=255) aTACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGCAGTGTGCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCatgatg < 2:1045835/150‑1 (MQ=255) aTACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCatgatg > 2:858359/1‑150 (MQ=255) tCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGc > 1:448173/1‑93 (MQ=255) tCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGc < 2:448173/93‑1 (MQ=255) tCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGc > 2:52914/1‑124 (MQ=255) tCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGc < 1:52914/124‑1 (MQ=255) ccATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGc < 1:1395872/150‑1 (MQ=255) ccATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGc < 2:1218647/150‑1 (MQ=255) aTGCCGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACATGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCAt < 2:151869/150‑1 (MQ=255) | GTACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCAT > NC_002947/3763398‑3763694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |