| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 390,096 | A→C | 9.6% | M123L (ATG→CTG) | soxA → | sarcosine oxidase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 390,096 | 0 | A | C | 9.6% | 222.8 / 16.0 | 83 | M123L (ATG→CTG) | soxA | sarcosine oxidase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (41/34); new base C (5/3); total (46/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.35e-01 | |||||||||||
TCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCA > NC_002947/389950‑390238 | tCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgc > 1:264161/1‑150 (MQ=255) tCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGccgccg > 2:261513/1‑150 (MQ=255) tCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGccgccg > 2:910755/1‑150 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCggg > 1:203269/1‑150 (MQ=255) aGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc > 1:1326031/1‑150 (MQ=255) gAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTc < 1:1187345/150‑1 (MQ=255) gAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTc < 2:1326031/150‑1 (MQ=255) gCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctac < 2:264161/150‑1 (MQ=255) gCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAAAGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctac < 2:800715/150‑1 (MQ=255) tACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 1:624901/1‑150 (MQ=255) aCCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCtactac < 2:624901/150‑1 (MQ=255) cccAGCTTGCGCGCCCCCGAGCAGGCACTGTACGCGGGCCTTGTCGCCACCAGTACCAACGGTTGGCCGAACGTCAACAACGACGTCATCGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCTGGCTTCTACTACAAAACCTTc < 2:1079040/150‑1 (MQ=255) cccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 2:1270150/150‑1 (MQ=255) cccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 2:613205/150‑1 (MQ=255) cccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 1:1244497/1‑150 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCa > 1:1252877/1‑150 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCGGCCGGGCTTCTACTACAAACCCTTCAt < 2:575768/150‑1 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc > 2:838156/1‑130 (MQ=255) cAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc < 1:838156/130‑1 (MQ=255) gTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTAc < 2:1244497/150‑1 (MQ=255) gcgcCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGTGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCa > 1:797661/1‑150 (MQ=255) gcCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCaaa > 2:58715/1‑150 (MQ=255) aCCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCg > 1:1346838/1‑150 (MQ=255) aCCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCg > 1:546314/1‑150 (MQ=255) ccAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACGATAGGTTGGGCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGtt > 2:760810/1‑150 (MQ=255) cAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACGCCAAATCGGTc > 2:396812/1‑150 (MQ=255) aaCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGtt < 2:364375/148‑1 (MQ=255) aaCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGtt > 1:364375/1‑148 (MQ=255) aGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGa > 2:1389393/1‑150 (MQ=255) gCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGACGCCAGGCTTCCACTGCAAAACCTTCATGTACCCCAAATCGTTCTGGATg > 1:1026600/1‑150 (MQ=255) cTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 2:869196/123‑1 (MQ=255) cTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 1:869196/1‑123 (MQ=255) tACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTAc < 2:1252877/150‑1 (MQ=255) cgcgGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACga < 2:1346838/150‑1 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGaa < 2:797661/150‑1 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGaa < 2:203269/150‑1 (MQ=255) ccTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGa > 1:832844/1‑137 (MQ=255) ccTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGa < 2:832844/137‑1 (MQ=255) ccTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTa > 1:472819/1‑150 (MQ=255) ttGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACa > 1:1138641/1‑150 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTAccc > 1:409593/1‑112 (MQ=255) ccaccaGCACCAACGGTTGGCCGAACGTCAAAAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTAccc < 2:409593/112‑1 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc > 2:192509/1‑85 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc < 1:192509/85‑1 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACga < 1:490362/135‑1 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACga > 2:490362/1‑135 (MQ=255) caGCAACAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgc > 1:836841/1‑150 (MQ=255) gCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGt < 1:209656/135‑1 (MQ=255) gCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGt > 2:209656/1‑135 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCAt < 1:224676/96‑1 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCAt > 2:224676/1‑96 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCAACCTCGGCAAGGTAGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACTTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCgg > 2:520557/1‑150 (MQ=255) gTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTgg > 1:875199/1‑150 (MQ=255) gTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTgg > 2:755556/1‑150 (MQ=255) gAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAAACCGCAACTACCCCAAATCGTTCTGGATGACTTAAGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc > 1:386297/1‑150 (MQ=255) tCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgcgcgcc < 1:760810/150‑4 (MQ=255) gTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGAt > 2:324696/1‑150 (MQ=255) tCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATc > 2:721356/1‑150 (MQ=255) tCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATc < 1:58715/150‑1 (MQ=255) aTGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCt > 1:1031577/1‑150 (MQ=255) gggCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGa > 2:913472/1‑150 (MQ=255) ggCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGCTCCTGAc < 2:1026600/150‑1 (MQ=255) gCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACa < 1:721356/150‑1 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCt < 2:1031577/150‑1 (MQ=255) ccTCGGCAAGGTTGGCGGCAGCATGATGCCGACGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTa > 2:874801/1‑150 (MQ=255) cTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTAc > 1:142738/1‑150 (MQ=255) ggCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGAc < 1:910755/150‑1 (MQ=255) aGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACa < 1:755556/150‑1 (MQ=255) gcccggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt > 1:416659/5‑150 (MQ=255) ccggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTgg < 2:1381482/103‑1 (MQ=255) ccggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTgg > 1:1381482/3‑105 (MQ=255) gcccggcggCATCATGCTGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGaa > 1:888403/4‑123 (MQ=255) gcccggcggCATCATGCTGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGaa < 2:888403/120‑1 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgcc < 1:934791/96‑1 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAgccgcc > 2:934791/2‑97 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGaa > 2:965623/2‑150 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGaa > 1:1269074/2‑150 (MQ=255) gcggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAAcc < 1:1389393/150‑1 (MQ=255) ggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaaa > 1:971812/1‑87 (MQ=255) ggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaaa < 2:971812/87‑1 (MQ=255) gcagcaTGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGccgccg < 2:129883/93‑1 (MQ=255) gcagcaTGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGccgccg > 1:129883/1‑93 (MQ=255) catcaTGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCa < 1:965623/147‑1 (MQ=255) atgatgCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTggg < 1:534200/95‑1 (MQ=255) atgatgCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTggg > 2:534200/1‑95 (MQ=255) | TCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGGCA > NC_002947/389950‑390238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |