| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,524,526 | T→C | 6.2% | intergenic (+105/‑88) | idh → / → PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,524,526 | 0 | T | C | 6.2% | 293.4 / 4.9 | 99 | intergenic (+105/‑88) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| Reads supporting (aligned to +/- strand): ref base T (53/39); new base C (3/3); total (57/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
AAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCT > NC_002947/4524385‑4524674 | tgaagacgtgctggttggctttgaattcctcgacgaagaggaacttgccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTGAAcccgctc > 1:128616‑M1/128‑148 (MQ=255) ccAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAGCAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATg > 2:417223/1‑150 (MQ=255) ccAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATGTCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATg > 1:103555/1‑150 (MQ=255) aCCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTc > 2:824523/1‑150 (MQ=255) aCCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTc > 2:1193063/1‑150 (MQ=255) aCCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTc > 1:24180/1‑150 (MQ=255) cccTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCa > 2:955155/1‑150 (MQ=255) cccTGAACAGCGCCATCGCTGCCCTGAAAGGTCCCCGGTTAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCa < 2:824797/150‑1 (MQ=255) tGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCAttt < 2:429690/150‑1 (MQ=255) aaCAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTTTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGc < 1:275188/150‑1 (MQ=255) aCAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGcc > 2:1397478/1‑150 (MQ=255) aGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCACGGCCGCGAACCGGGGTTTGTGCTTGCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTc > 1:1243792/1‑150 (MQ=255) aTCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTACATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATc < 2:1313155/150‑1 (MQ=255) cTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCAt < 2:999680/150‑1 (MQ=255) tGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCAtt > 2:1407840/1‑150 (MQ=255) ctcgacgaagaggaacttgccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTc > 2:768138‑M1/100‑150 (MQ=255) cTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTcgcg > 1:1376298/1‑150 (MQ=255) tGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg < 1:1193063/150‑1 (MQ=255) tGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg < 2:24180/150‑1 (MQ=255) tGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 2:705205/1‑150 (MQ=255) acgaagaggaacttgccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 1:1164572‑M1/96‑150 (MQ=255) gTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCggg < 2:766857/150‑1 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAAc < 1:941976/150‑1 (MQ=255) gTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAAc < 1:1397478/150‑1 (MQ=255) ggaacttgccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg < 1:190877‑M1/55‑1 (MQ=255) ggaacttgccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 2:190877‑M1/89‑143 (MQ=255) gCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGc > 2:778352/1‑150 (MQ=255) cTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCt > 1:591670/1‑150 (MQ=255) cTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCt > 2:701700/1‑150 (MQ=255) ccttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTa < 2:1117803‑M1/70‑1 (MQ=255) aaGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTa > 2:166102/1‑150 (MQ=255) aGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCTGCCGTTGGAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTAc > 2:760184/1‑150 (MQ=255) ttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 2:880026‑M1/79‑133 (MQ=255) ttcgtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg < 1:880026‑M1/55‑1 (MQ=255) gtgctcgacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAggg > 1:1117803‑M1/76‑150 (MQ=255) aCAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAggg > 1:1276120/1‑150 (MQ=255) aCAGCACAAACCCCGGCCACGCACCGGGGTGTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAggg > 2:1155113/1‑150 (MQ=255) acaAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCAt > 2:65574/1‑150 (MQ=255) acaAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCAt < 1:701700/150‑1 (MQ=255) acaAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCAt > 1:1058974/1‑150 (MQ=255) acaAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTAATCGGCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCag > 1:1366061/1‑149 (MQ=255) gacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTcgc < 1:1007434‑M1/53‑1 (MQ=255) gacgatggtggcgacggtgatgtggggttgccaggtcatgaacagctccttgaaggcgtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTcgc > 2:1007434‑M1/70‑122 (MQ=255) aaaCCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGc > 1:815344/1‑150 (MQ=255) cccGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGc > 2:1256245/1‑150 (MQ=255) cccGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGc < 2:1243792/150‑1 (MQ=255) ccGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGcc > 2:691901/1‑150 (MQ=255) ggCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATGTCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCtt < 2:103555/150‑1 (MQ=255) gcgtggccGGGGTTTGTGTTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCTGGTGCTCCCGCTCCTACAGGGGTCATGCACGCCTTCaa < 1:216182/144‑1 (MQ=38) cACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCaa < 1:778352/150‑1 (MQ=255) cACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCaa < 1:963833/150‑1 (MQ=255) tggccGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGa < 2:153147/147‑1 (MQ=255) gCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGa < 2:47472/150‑1 (MQ=255) cACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAg < 1:417223/150‑1 (MQ=255) ccGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCt < 1:1407840/150‑1 (MQ=255) cGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTg < 1:166102/150‑1 (MQ=255) ggTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTc < 1:955155/150‑1 (MQ=255) tttGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCAt < 2:1376298/150‑1 (MQ=255) tttGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACACGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCAt < 2:1114913/150‑1 (MQ=255) tgtgCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGa < 1:824523/150‑1 (MQ=255) tgCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCt > 1:564977/1‑140 (MQ=255) tgCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCt < 2:564977/140‑1 (MQ=255) gCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCt > 2:914210/1‑150 (MQ=255) cTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTg < 1:65574/150‑1 (MQ=255) tGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAAc < 2:591670/150‑1 (MQ=255) tGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAAc > 1:1188789/1‑150 (MQ=255) gATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAg > 2:921944/1‑129 (MQ=255) gATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAg < 1:921944/129‑1 (MQ=255) tAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGACTACGTCATTTGCCTCCCGATCACATTCGGGGGTGAGCCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATCACCTGGCAACCCca > 1:883099/1‑150 (MQ=38) aaTGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCa < 2:732053/69‑1 (MQ=255) aaTGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCa > 1:732053/1‑69 (MQ=255) cttgaaggcgtgcatgaccctTGTAGGAGCGGGTTTACCCGCGAGTGCGTCATTTGCCTCACCATCGCGCGTTCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCGACATCACCGTc < 1:811073‑M1/129‑1 (MQ=255) cTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTc < 1:705205/150‑1 (MQ=255) ttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg < 2:311103‑M1/55‑1 (MQ=255) ttgaaggcgtgcatgaccccTGTAGGAGCGGGTTCACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 1:311103‑M1/21‑75 (MQ=255) cggcCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGcca < 1:691901/150‑1 (MQ=255) ccTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAg < 2:458686/110‑1 (MQ=255) ccTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAg > 1:458686/1‑110 (MQ=255) gtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGc < 1:693318‑M1/27‑1 (MQ=255) gtgcatgaccccTGTAGGAGCGGGTTTACCCGCGAATGc > 2:693318‑M1/13‑39 (MQ=255) cATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCAtcgt > 1:1216003/1‑150 (MQ=255) tCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCAtcgtcg > 1:821282/1‑150 (MQ=255) cGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGa > 1:185914/1‑150 (MQ=255) gCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGc > 2:1191589/1‑150 (MQ=255) cTTTGTAGGAGCGGGTTTACCCACGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCAc > 1:485678/1‑150 (MQ=255) tttGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACg > 2:720955/1‑150 (MQ=255) ttGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGACTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGa > 2:114684/1‑150 (MQ=255) GTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAg > 1:1256245‑M1/1‑150 (MQ=255) GTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAg > 2:52858‑M1/1‑150 (MQ=255) AGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCCACGTCGAGCACGAAGGc > 1:760184‑M1/1‑150 (MQ=255) AGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAg > 2:821282‑M1/1‑150 (MQ=255) GCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCACACATCACCGTCGCCACCATCGTCGAGc > 1:381280‑M1/1‑138 (MQ=255) GCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCACACATCACCGTCGCCACCATCGTCGAGc < 2:381280‑M1/138‑1 (MQ=255) GCGCGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGt > 2:883099‑M1/1‑150 (MQ=255) GGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGACATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTcc < 2:479705‑M1/150‑1 (MQ=255) GTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCct > 1:914210‑M1/1‑150 (MQ=255) GTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCct > 1:720955‑M1/1‑150 (MQ=255) TTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCctc > 2:1188789‑M1/1‑150 (MQ=255) TTACCCGCGAATGCGTTATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCctct > 2:811073‑M1/1‑150 (MQ=255) | AAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCT > NC_002947/4524385‑4524674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |