| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,561,287 | G→C | 6.8% | I102M (ATC→ATG) | PP_4048 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,561,287 | 0 | G | C | 6.8% | 231.6 / 6.8 | 74 | I102M (ATC→ATG) | PP_4048 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (36/33); new base C (2/3); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01 | |||||||||||
AAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGC > NC_002947/4561140‑4561431 | aaaCGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGTCCCCACCACAGCGCCgatgat < 2:162956/150‑1 (MQ=255) aCGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCg > 1:633706/1‑150 (MQ=255) gCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCCCCGCCCCCACCACAGCGCCGATGATCGgc < 1:399633/150‑1 (MQ=255) aCCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATCATCGgcgct < 1:587661/150‑2 (MQ=255) cTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCa > 2:239343/1‑150 (MQ=255) cTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATCATCGgcgctgtgg < 2:133796/150‑6 (MQ=255) gTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCGGAGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 1:811457/150‑1 (MQ=255) gTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 1:159673/150‑1 (MQ=255) ggATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑Gtcatca > 2:269231/1‑150 (MQ=255) cTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGCACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCaggcaggc > 2:985057/1‑150 (MQ=255) tGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACACCGCCGCTGATCGTCGCGCTCAGG‑GGCATCCGGCAGGcc > 2:525911/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGccacca > 1:1351285/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGccacca < 2:635153/150‑1 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGccacca > 1:194744/1‑150 (MQ=255) tttCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGccacca < 1:239343/150‑1 (MQ=255) tCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGc > 1:776153/1‑150 (MQ=255) gTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAaca > 1:381172/1‑150 (MQ=255) tCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACAccc > 2:27937/1‑150 (MQ=255) aaCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCAc > 1:389598/1‑150 (MQ=255) aaCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCACTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCAc < 1:1247991/150‑1 (MQ=255) aaCAGCAAACACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCAc > 2:183599/1‑150 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCGGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGA‑CAACAACAACAGGTGGCATCAGGCAGGCCACCAGCAACACCCAct > 2:824496/1‑150 (MQ=255) caagcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACAcc < 1:440091/142‑1 (MQ=255) caagcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACAcc > 2:440091/1‑142 (MQ=255) agcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑Gtc > 1:1225488/1‑116 (MQ=255) agcaCAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑Gtc < 2:1225488/116‑1 (MQ=255) acaAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCAtt < 2:633706/150‑1 (MQ=255) aaaCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTcc > 2:200966/1‑150 (MQ=255) aaGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgc > 1:1018497/1‑150 (MQ=255) gctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGAGGCGTTGcc < 2:381172/150‑1 (MQ=255) ctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATc < 2:1338020/77‑1 (MQ=255) ctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATc > 1:1338020/1‑77 (MQ=255) ctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCt < 1:269231/150‑1 (MQ=255) ccTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGc > 1:721314/1‑150 (MQ=255) cTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGTTATCGGG‑GTCATCAGGCAGGCCACCAGCAACACCCAATCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc < 1:824496/150‑1 (MQ=255) ccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATCATCGgc < 1:246337/69‑1 (MQ=255) ccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATCATCGgc > 2:246337/1‑69 (MQ=255) cAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCACACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccg > 1:615769/1‑150 (MQ=255) aaCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgc < 1:200966/150‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTc > 2:834040/1‑142 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTc < 1:834040/142‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGt > 1:414199/1‑150 (MQ=255) cgcCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgc < 2:414199/150‑1 (MQ=255) cTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcggc < 1:758530/119‑1 (MQ=255) cTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcggc > 2:758530/1‑119 (MQ=255) cTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCt > 1:1392782/1‑150 (MQ=255) tGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCg < 1:354307/53‑1 (MQ=255) tGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCg > 2:354307/1‑53 (MQ=255) cATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgc > 1:713294/1‑143 (MQ=255) cATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgc < 2:713294/143‑1 (MQ=255) cATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGAACGGCGCTATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTCCCTGGCTGCCGTCCGCCGCGTAgcgcgtccc > 2:308671/1‑145 (MQ=255) tCGAGCCCACGGGAGTGACCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGACCGCCGCGTAGCGCTTGCCCa > 2:837553/1‑150 (MQ=255) gAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAgg < 1:703867/150‑1 (MQ=255) cccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgcgc > 2:1117812/1‑150 (MQ=255) cccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgcgc > 2:390864/1‑150 (MQ=255) ccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 1:682008/53‑1 (MQ=255) ccACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAgg > 2:682008/1‑53 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAg > 2:507610/1‑150 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAg < 2:1018497/150‑1 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAg < 1:1117812/150‑1 (MQ=255) ccGGGATTGCCCACCTCCCCCACCACAGCGCCAATGATCGACGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCCCTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAgg < 2:392458/149‑1 (MQ=255) aCGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAgg < 2:1392782/150‑1 (MQ=255) aGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCacac > 2:577504/1‑150 (MQ=255) ctGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGACGACCTCCGCGTAGCGCTTGCCCAGGCGCAGGCACAcc < 1:337731/149‑1 (MQ=255) cccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCAGTACGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCgag > 2:337731/1‑148 (MQ=255) cGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAg < 2:469485/150‑1 (MQ=255) cGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAg < 1:390864/150‑1 (MQ=255) ccaccaCAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCtt < 2:1079819/66‑1 (MQ=255) ccaccaCAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCtt > 1:1079819/1‑66 (MQ=255) accacAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGTGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACgg < 1:308671/150‑1 (MQ=255) caGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCAc < 1:507610/150‑1 (MQ=255) cgcCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcgg > 2:125531/1‑76 (MQ=255) cgcCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcgg < 1:125531/76‑1 (MQ=255) gcCGATCATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAg > 2:91215/1‑150 (MQ=255) ccGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGc < 2:776153/150‑1 (MQ=255) | AAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGG‑GTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGC > NC_002947/4561140‑4561431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |