Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,783,595 | C→A | 5.3% | W1255L (TGG→TTG) | pvdJ ← | non‑ribosomal peptide synthetase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,783,595 | 0 | C | A | 5.3% | 246.4 / 2.3 | 76 | W1255L (TGG→TTG) | pvdJ | non‑ribosomal peptide synthetase |
Reads supporting (aligned to +/- strand): ref base C (34/38); new base A (2/2); total (36/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01 |
GCATGCGCCGCCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGA > NC_002947/4783451‑4783744 | gCATGCGCCGCCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTgg < 1:665954/150‑1 (MQ=255) aTGCGCCGCCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGTTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGgcg > 1:551643/1‑150 (MQ=255) gcgcCGCCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCa > 2:889869/1‑150 (MQ=255) cgccgcCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAg < 2:443906/150‑1 (MQ=255) gccgccTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAgg < 2:468978/150‑1 (MQ=255) gcgcAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGa > 1:250009/1‑150 (MQ=255) cAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCt < 1:889869/150‑1 (MQ=255) gTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGAc > 1:1163362/1‑145 (MQ=255) gTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGAc < 2:1163362/145‑1 (MQ=255) gTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGa > 1:376143/1‑150 (MQ=255) aTTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTg > 2:537532/1‑124 (MQ=255) aTTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTg < 1:537532/124‑1 (MQ=255) aTTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCa > 2:712134/1‑150 (MQ=255) aTTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCa < 1:303059/150‑1 (MQ=255) aTTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTGCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCa > 1:1168359/1‑150 (MQ=255) ccTCGCGGGTCATGGCAAGCCAGCCCTCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTc < 2:661780/150‑1 (MQ=255) ggTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCTCGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCt > 2:126347/1‑150 (MQ=255) aTCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGccc < 1:488691/150‑1 (MQ=255) tCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGa > 1:560117/1‑128 (MQ=255) tCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGa < 2:560117/128‑1 (MQ=255) cAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAgg < 1:756876/150‑1 (MQ=255) ggCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTa > 1:510587/1‑150 (MQ=255) gCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGCGCCAGTAATCCCGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGCGTGCCGACCTGGCCGGCAGGCTCACCGCCTGCCCTAGGCTAg > 2:174626/1‑150 (MQ=255) gCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAg > 1:63408/1‑150 (MQ=255) tCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGc < 2:1359854/146‑1 (MQ=255) tCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGc > 1:1359854/1‑146 (MQ=255) tCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCctgc < 2:1350091/150‑1 (MQ=255) cGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCctgct < 2:5875/150‑1 (MQ=255) gCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCctgctg < 1:154727/150‑1 (MQ=255) ccGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTa > 2:1252474/1‑140 (MQ=255) ccGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTa < 1:1252474/140‑1 (MQ=255) ccGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGt > 2:1316321/1‑150 (MQ=255) gcgGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAg < 2:63408/150‑1 (MQ=255) tgctgcGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTc < 2:125898/150‑1 (MQ=255) tgcGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCGTTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAgg > 1:1062400/1‑142 (MQ=255) tgcGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAgg < 2:1062400/142‑1 (MQ=255) tGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTCCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTACCCTACCCTATCCTGCTGGTAGGCCGTCTGCAGGTCTTCg > 2:472800/1‑150 (MQ=255) aGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAAc < 1:1374542/150‑1 (MQ=255) aGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAAc < 1:182431/150‑1 (MQ=255) gCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACa < 2:1168359/150‑1 (MQ=255) aGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGc < 1:405242/115‑1 (MQ=255) aGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGc > 2:405242/1‑115 (MQ=255) aCGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCa > 1:1092520/1‑150 (MQ=255) gTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCAt < 1:588035/53‑1 (MQ=255) gTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCAt > 2:588035/1‑53 (MQ=255) gTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAg > 2:426459/1‑150 (MQ=255) cAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGccc < 1:1216456/94‑1 (MQ=255) cAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGccc > 2:1216456/1‑94 (MQ=255) aGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGacac < 2:510587/150‑1 (MQ=255) tCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATccaccacc < 2:551643/150‑1 (MQ=255) gCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAg > 2:1165914/1‑150 (MQ=255) cTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCGCCACCAgg < 2:376143/150‑1 (MQ=255) cgcgcATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGt > 1:546880/1‑148 (MQ=255) cgcgcATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGt < 2:546880/148‑1 (MQ=255) gcATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGc < 2:417359/150‑1 (MQ=255) gcATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGc > 1:1064807/1‑150 (MQ=255) cATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCa > 1:890762/1‑150 (MQ=255) aTAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCg > 2:213587/1‑92 (MQ=255) aTAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCg < 1:213587/92‑1 (MQ=255) aTAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCAc < 2:250009/150‑1 (MQ=255) gTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGc < 2:794615/150‑1 (MQ=255) catcaAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCa < 2:1092520/150‑1 (MQ=255) atcaAGCTGTCGCGCCCATTGGCGCAGGGGTGCAGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGATGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAg > 1:473535/1‑150 (MQ=255) tcaAGCTGTCACGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGAt < 2:975949/107‑1 (MQ=255) tcaAGCTGTCACGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGAt > 1:975949/1‑107 (MQ=255) aGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGAGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAAc > 1:456997/1‑150 (MQ=255) gCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCctgc < 2:1171118/71‑1 (MQ=255) gCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCctgc > 1:1171118/1‑71 (MQ=255) cctgcgcCAATGGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAgg > 1:478882/4‑128 (MQ=255) cctgcgcCAATGGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAgg < 2:478882/125‑1 (MQ=255) cctgcgcCAATGGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGAt > 1:1281265/4‑132 (MQ=255) cctgcgcCAATGGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGAt < 2:1281265/129‑1 (MQ=255) tCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCGGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCg > 1:455612/1‑150 (MQ=255) tCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGccc < 2:802938/150‑2 (MQ=255) cgcCCATTGGCGCAGGTGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTACGCAGTTTCCAGGTCTTCAAACGCTATTCGCGAAGACACCTCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTg < 1:174626/150‑1 (MQ=255) gcCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGc > 1:1183411/1‑150 (MQ=255) cATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGa < 1:126347/150‑1 (MQ=255) | GCATGCGCCGCCTGGCGCAGGTTGCATTCGCCTTGCGGGTTATCGCAAGGCAGCTCGCCCGCGGGCTGCTGCGCGGCCTGGAGCCAGTAATCACGTTCAGCCTGCAGGTTTTCGCTGCGCGCATAGTCATCAAGCTGTCGCGCCCATTGGCGCAGGGGTGCCGACCTGGACGGCAGGCTCACCGCCTGCCCTAGGCTAGCCTGCTGGTAGGCCGTCTGCAGGTCTTCGAACAGGATGCGCCAAGACACCCCATCCACCACCAGGTGATGCACCGCCAGCAACAGCCGTTGCTGA > NC_002947/4783451‑4783744 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |